Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19785 and BWI76_RS19790 overlap by 1 nucleotides BWI76_RS19790 and BWI76_RS19795 are separated by 1 nucleotides
BWI76_RS19785: BWI76_RS19785 - microcin C ABC transporter permease YejB, at 4,137,503 to 4,138,597
_RS19785
BWI76_RS19790: BWI76_RS19790 - putative binding-protein-dependent transporter, at 4,138,597 to 4,139,622
_RS19790
BWI76_RS19795: BWI76_RS19795 - microcin C ABC transporter ATP-binding protein YejF, at 4,139,624 to 4,141,213
_RS19795
Position (kb)
4138
4139
4140 Strain fitness (log2 ratio)
-1
0
1 at 4137.747 kb on + strand, within BWI76_RS19785 at 4137.922 kb on - strand, within BWI76_RS19785 at 4137.935 kb on + strand, within BWI76_RS19785 at 4138.357 kb on - strand, within BWI76_RS19785 at 4138.387 kb on - strand, within BWI76_RS19785 at 4138.422 kb on - strand, within BWI76_RS19785 at 4138.554 kb on + strand at 4138.562 kb on - strand at 4138.837 kb on - strand, within BWI76_RS19790 at 4138.964 kb on - strand, within BWI76_RS19790 at 4139.086 kb on + strand, within BWI76_RS19790 at 4139.115 kb on + strand, within BWI76_RS19790 at 4139.181 kb on + strand, within BWI76_RS19790 at 4139.189 kb on - strand, within BWI76_RS19790 at 4139.393 kb on + strand, within BWI76_RS19790 at 4140.272 kb on - strand, within BWI76_RS19795 at 4140.272 kb on - strand, within BWI76_RS19795 at 4140.381 kb on - strand, within BWI76_RS19795 at 4140.381 kb on - strand, within BWI76_RS19795 at 4140.409 kb on + strand, within BWI76_RS19795 at 4140.577 kb on - strand, within BWI76_RS19795
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 4,137,747 + BWI76_RS19785 0.22 -1.1 4,137,922 - BWI76_RS19785 0.38 +0.4 4,137,935 + BWI76_RS19785 0.39 +0.8 4,138,357 - BWI76_RS19785 0.78 +1.4 4,138,387 - BWI76_RS19785 0.81 -0.2 4,138,422 - BWI76_RS19785 0.84 +0.2 4,138,554 + +0.1 4,138,562 - +0.5 4,138,837 - BWI76_RS19790 0.23 +0.1 4,138,964 - BWI76_RS19790 0.36 +1.2 4,139,086 + BWI76_RS19790 0.48 +0.6 4,139,115 + BWI76_RS19790 0.50 -0.4 4,139,181 + BWI76_RS19790 0.57 +1.3 4,139,189 - BWI76_RS19790 0.58 +0.4 4,139,393 + BWI76_RS19790 0.78 -0.3 4,140,272 - BWI76_RS19795 0.41 -0.1 4,140,272 - BWI76_RS19795 0.41 +0.4 4,140,381 - BWI76_RS19795 0.48 -0.1 4,140,381 - BWI76_RS19795 0.48 +0.1 4,140,409 + BWI76_RS19795 0.49 +0.8 4,140,577 - BWI76_RS19795 0.60 +0.4
Or see this region's nucleotide sequence