Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19445

Experiment: L-Alanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19440 and BWI76_RS19445 are separated by 10 nucleotidesBWI76_RS19445 and BWI76_RS19450 overlap by 1 nucleotides BWI76_RS19440: BWI76_RS19440 - putative transporter subunit, at 4,061,115 to 4,062,203 _RS19440 BWI76_RS19445: BWI76_RS19445 - hypothetical protein, at 4,062,214 to 4,064,499 _RS19445 BWI76_RS19450: BWI76_RS19450 - hypothetical protein, at 4,064,499 to 4,065,635 _RS19450 Position (kb) 4062 4063 4064 4065Strain fitness (log2 ratio) -1 0 1at 4061.256 kb on - strand, within BWI76_RS19440at 4061.405 kb on - strand, within BWI76_RS19440at 4061.551 kb on - strand, within BWI76_RS19440at 4061.682 kb on + strand, within BWI76_RS19440at 4061.860 kb on + strand, within BWI76_RS19440at 4062.257 kb on - strandat 4062.261 kb on - strandat 4062.261 kb on - strandat 4062.263 kb on + strandat 4062.383 kb on - strandat 4062.497 kb on - strand, within BWI76_RS19445at 4062.525 kb on + strand, within BWI76_RS19445at 4062.582 kb on + strand, within BWI76_RS19445at 4062.601 kb on - strand, within BWI76_RS19445at 4062.732 kb on - strand, within BWI76_RS19445at 4062.999 kb on + strand, within BWI76_RS19445at 4063.156 kb on - strand, within BWI76_RS19445at 4063.377 kb on + strand, within BWI76_RS19445at 4063.553 kb on + strand, within BWI76_RS19445at 4064.182 kb on + strand, within BWI76_RS19445at 4064.352 kb on - strandat 4064.535 kb on + strandat 4064.535 kb on - strandat 4064.587 kb on + strandat 4064.653 kb on + strand, within BWI76_RS19450at 4064.725 kb on + strand, within BWI76_RS19450at 4064.867 kb on - strand, within BWI76_RS19450at 4065.057 kb on + strand, within BWI76_RS19450at 4065.162 kb on + strand, within BWI76_RS19450

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (C)
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4,061,256 - BWI76_RS19440 0.13 -1.1
4,061,405 - BWI76_RS19440 0.27 +0.2
4,061,551 - BWI76_RS19440 0.40 -0.4
4,061,682 + BWI76_RS19440 0.52 -0.2
4,061,860 + BWI76_RS19440 0.68 -0.4
4,062,257 - +1.2
4,062,261 - +0.3
4,062,261 - -0.6
4,062,263 + -0.0
4,062,383 - -0.9
4,062,497 - BWI76_RS19445 0.12 +0.3
4,062,525 + BWI76_RS19445 0.14 +0.4
4,062,582 + BWI76_RS19445 0.16 -0.1
4,062,601 - BWI76_RS19445 0.17 -0.6
4,062,732 - BWI76_RS19445 0.23 -1.7
4,062,999 + BWI76_RS19445 0.34 +0.8
4,063,156 - BWI76_RS19445 0.41 +0.0
4,063,377 + BWI76_RS19445 0.51 +0.9
4,063,553 + BWI76_RS19445 0.59 +0.7
4,064,182 + BWI76_RS19445 0.86 +1.0
4,064,352 - +0.1
4,064,535 + -0.3
4,064,535 - +0.0
4,064,587 + -0.1
4,064,653 + BWI76_RS19450 0.14 -0.2
4,064,725 + BWI76_RS19450 0.20 -0.3
4,064,867 - BWI76_RS19450 0.32 +0.6
4,065,057 + BWI76_RS19450 0.49 -0.3
4,065,162 + BWI76_RS19450 0.58 +0.1

Or see this region's nucleotide sequence