Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19440 and BWI76_RS19445 are separated by 10 nucleotides BWI76_RS19445 and BWI76_RS19450 overlap by 1 nucleotides
BWI76_RS19440: BWI76_RS19440 - putative transporter subunit, at 4,061,115 to 4,062,203
_RS19440
BWI76_RS19445: BWI76_RS19445 - hypothetical protein, at 4,062,214 to 4,064,499
_RS19445
BWI76_RS19450: BWI76_RS19450 - hypothetical protein, at 4,064,499 to 4,065,635
_RS19450
Position (kb)
4062
4063
4064
4065 Strain fitness (log2 ratio)
-1
0
1 at 4061.256 kb on - strand, within BWI76_RS19440 at 4061.405 kb on - strand, within BWI76_RS19440 at 4061.551 kb on - strand, within BWI76_RS19440 at 4061.682 kb on + strand, within BWI76_RS19440 at 4061.860 kb on + strand, within BWI76_RS19440 at 4062.257 kb on - strand at 4062.261 kb on - strand at 4062.261 kb on - strand at 4062.263 kb on + strand at 4062.383 kb on - strand at 4062.497 kb on - strand, within BWI76_RS19445 at 4062.525 kb on + strand, within BWI76_RS19445 at 4062.582 kb on + strand, within BWI76_RS19445 at 4062.601 kb on - strand, within BWI76_RS19445 at 4062.732 kb on - strand, within BWI76_RS19445 at 4062.999 kb on + strand, within BWI76_RS19445 at 4063.156 kb on - strand, within BWI76_RS19445 at 4063.377 kb on + strand, within BWI76_RS19445 at 4063.553 kb on + strand, within BWI76_RS19445 at 4064.182 kb on + strand, within BWI76_RS19445 at 4064.352 kb on - strand at 4064.535 kb on + strand at 4064.535 kb on - strand at 4064.587 kb on + strand at 4064.653 kb on + strand, within BWI76_RS19450 at 4064.725 kb on + strand, within BWI76_RS19450 at 4064.867 kb on - strand, within BWI76_RS19450 at 4065.057 kb on + strand, within BWI76_RS19450 at 4065.162 kb on + strand, within BWI76_RS19450
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 4,061,256 - BWI76_RS19440 0.13 -1.1 4,061,405 - BWI76_RS19440 0.27 +0.2 4,061,551 - BWI76_RS19440 0.40 -0.4 4,061,682 + BWI76_RS19440 0.52 -0.2 4,061,860 + BWI76_RS19440 0.68 -0.4 4,062,257 - +1.2 4,062,261 - +0.3 4,062,261 - -0.6 4,062,263 + -0.0 4,062,383 - -0.9 4,062,497 - BWI76_RS19445 0.12 +0.3 4,062,525 + BWI76_RS19445 0.14 +0.4 4,062,582 + BWI76_RS19445 0.16 -0.1 4,062,601 - BWI76_RS19445 0.17 -0.6 4,062,732 - BWI76_RS19445 0.23 -1.7 4,062,999 + BWI76_RS19445 0.34 +0.8 4,063,156 - BWI76_RS19445 0.41 +0.0 4,063,377 + BWI76_RS19445 0.51 +0.9 4,063,553 + BWI76_RS19445 0.59 +0.7 4,064,182 + BWI76_RS19445 0.86 +1.0 4,064,352 - +0.1 4,064,535 + -0.3 4,064,535 - +0.0 4,064,587 + -0.1 4,064,653 + BWI76_RS19450 0.14 -0.2 4,064,725 + BWI76_RS19450 0.20 -0.3 4,064,867 - BWI76_RS19450 0.32 +0.6 4,065,057 + BWI76_RS19450 0.49 -0.3 4,065,162 + BWI76_RS19450 0.58 +0.1
Or see this region's nucleotide sequence