Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11530

Experiment: Cytidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (C)
2,547,719	+		AO353_11525	0.46	-1.3
2,547,719	+		AO353_11525	0.46	+0.5
2,547,719	+		AO353_11525	0.46	+0.5
2,547,719	+		AO353_11525	0.46	-0.4
2,547,719	+		AO353_11525	0.46	-0.2
2,547,720	-		AO353_11525	0.46	-0.5
2,547,720	-		AO353_11525	0.46	-1.5
2,547,720	-		AO353_11525	0.46	+0.3
2,547,724	+		AO353_11525	0.46	-0.8
2,547,724	+		AO353_11525	0.46	+0.4
2,547,724	+		AO353_11525	0.46	+0.2
2,547,725	-		AO353_11525	0.46	+0.1
2,547,725	-		AO353_11525	0.46	-0.5
2,547,725	-		AO353_11525	0.46	-0.2
2,547,725	-		AO353_11525	0.46	+0.4
2,547,725	-		AO353_11525	0.46	-1.9
2,547,725	-		AO353_11525	0.46	+0.4
2,547,740	+		AO353_11525	0.47	+1.7
2,547,740	+		AO353_11525	0.47	+0.4
2,547,740	+		AO353_11525	0.47	+0.5
2,547,741	-		AO353_11525	0.48	-0.6
2,547,741	-		AO353_11525	0.48	-1.2
2,547,741	-		AO353_11525	0.48	+0.2
2,547,741	-		AO353_11525	0.48	+0.0
2,547,741	-		AO353_11525	0.48	-1.1
2,547,741	-		AO353_11525	0.48	+0.7
2,547,741	-		AO353_11525	0.48	-0.2
2,547,741	-		AO353_11525	0.48	-1.5
2,547,970	+		AO353_11525	0.67	+0.5
2,547,971	-		AO353_11525	0.67	+1.5
2,547,971	-		AO353_11525	0.67	-0.8
2,547,971	-		AO353_11525	0.67	-0.3
2,547,971	-		AO353_11525	0.67	-1.0
2,547,971	-		AO353_11525	0.67	-0.4
2,547,971	-		AO353_11525	0.67	-0.3
2,547,971	-		AO353_11525	0.67	-0.8
2,548,012	+		AO353_11525	0.71	-0.2
2,548,013	-		AO353_11525	0.71	-0.8
2,548,013	-		AO353_11525	0.71	-0.2
2,548,013	-		AO353_11525	0.71	-0.4
2,548,264	+				-1.4
2,548,264	+				-0.2
2,548,264	+				+0.1
2,548,264	+				+0.5
2,548,265	-				-0.9
2,548,265	-				+0.7
2,548,300	-				-0.8
2,548,341	+				+0.4
2,548,351	+				+0.5
2,548,352	-				+0.3
2,548,352	-				+0.2
2,548,358	+				+0.1
2,548,358	+				-0.1
2,548,358	+				-0.4
2,548,358	+				-1.2
2,548,358	+				+0.6
2,548,358	+				+0.1
2,548,358	+				+1.0
2,548,359	-				-1.0
2,548,359	-				-0.1
2,548,359	-				+2.0
2,548,359	-				-1.9
2,548,359	-				+1.2
2,548,359	-				+0.7
2,548,359	-				+1.9
2,548,359	-				-1.1
2,548,359	-				+1.1
2,548,359	-				+1.1
2,548,359	-				-0.2
2,548,359	-				-0.9
2,548,359	-				+1.0
2,548,359	-				-1.1
2,548,359	-				+2.0
2,548,359	-				-1.4
2,548,365	+				+0.5
2,548,365	+				-0.5
2,548,366	-				-0.4
2,548,366	-				+0.7
2,548,366	-				-2.1
2,548,366	-				+0.6
2,548,366	-				-0.8
2,548,401	+				-1.1
2,548,419	+				+0.7
2,548,419	+				+0.1
2,548,419	+				+0.6
2,548,419	+				+0.8
2,548,419	+				+0.5
2,548,419	+				-0.5
2,548,420	-				+0.4
2,548,420	-				+0.3
2,548,420	-				-1.1
2,548,420	-				-1.3
2,548,420	-				-0.2
2,548,441	+				-1.1
2,548,441	+				+0.8
2,548,441	+				-1.4
2,548,441	+				-1.4
2,548,441	+				+0.1
2,548,441	+				+1.5
2,548,441	+				+0.2
2,548,441	+				+1.0
2,548,441	+				+0.5
2,548,442	-				-0.2
2,548,442	-				+0.0
2,548,442	-				+0.6
2,548,442	-				+0.3
2,548,442	-				-0.9
2,548,463	+				+0.8
2,548,464	-				+0.6
2,548,464	-				+0.1
2,548,468	+				-0.1
2,548,468	+				-0.8
2,548,468	+				+0.2
2,548,469	-				-0.4
2,548,469	-				+0.3
2,548,470	+				-0.1
2,548,470	+				+0.5
2,548,471	-				-2.2
2,548,471	-				-1.4
2,548,488	+				-0.2
2,548,488	+				-0.5
2,548,489	-				-0.3
2,548,489	-				-3.0
2,548,520	-				-0.9
2,548,549	+				-1.1
2,548,549	+				-1.2
2,548,549	+				-1.0
2,548,549	+				-0.1
2,548,549	+				+1.7
2,548,550	-				-1.2
2,548,550	-				-0.5
2,548,550	-				-2.2
2,548,550	-				-0.4
2,548,550	-				-0.9
2,548,550	-				-2.3
2,548,588	+				-0.9
2,548,588	+				-1.4
2,548,589	-				-0.3
2,548,593	-				-1.8
2,548,593	-				-1.5
2,548,651	+				-1.6
2,548,652	-				-1.3
2,548,680	+				+0.3
2,548,680	+				-1.1
2,548,680	+				+0.1
2,548,680	+				+1.6
2,548,681	-				-0.2
2,548,681	-				-0.9
2,548,681	-				-0.4
2,548,855	-		AO353_11530	0.18	-1.1
2,548,939	+		AO353_11530	0.23	-1.6
2,548,939	+		AO353_11530	0.23	-2.0
2,548,939	+		AO353_11530	0.23	+0.7
2,548,940	-		AO353_11530	0.23	-2.3
2,548,940	-		AO353_11530	0.23	-1.2
2,548,940	-		AO353_11530	0.23	+0.5
2,549,077	+		AO353_11530	0.30	-0.7
2,549,077	+		AO353_11530	0.30	-1.3
2,549,077	+		AO353_11530	0.30	-0.6
2,549,077	+		AO353_11530	0.30	-0.1
2,549,077	+		AO353_11530	0.30	-0.6
2,549,078	-		AO353_11530	0.30	-1.9
2,549,078	-		AO353_11530	0.30	-2.2
2,549,078	-		AO353_11530	0.30	-0.2
2,549,078	-		AO353_11530	0.30	-0.1
2,549,078	-		AO353_11530	0.30	+0.6
2,549,295	+		AO353_11530	0.41	+0.2
2,549,296	-		AO353_11530	0.41	-0.9
2,549,361	+		AO353_11530	0.44	-0.7
2,549,362	-		AO353_11530	0.45	-0.4
2,549,623	+		AO353_11530	0.58	-1.9
2,549,623	+		AO353_11530	0.58	+0.2
2,549,623	+		AO353_11530	0.58	-0.2
2,549,623	+		AO353_11530	0.58	-1.2
2,549,623	+		AO353_11530	0.58	-0.9
2,549,624	-		AO353_11530	0.58	-0.2
2,549,624	-		AO353_11530	0.58	-0.6
2,549,624	-		AO353_11530	0.58	-1.5
2,549,624	-		AO353_11530	0.58	-0.9
2,549,713	+		AO353_11530	0.63	-0.8
2,549,713	+		AO353_11530	0.63	-2.0
2,549,714	-		AO353_11530	0.63	-2.4
2,549,714	-		AO353_11530	0.63	-1.1
2,549,714	-		AO353_11530	0.63	-1.2
2,549,714	-		AO353_11530	0.63	-1.4
2,549,714	-		AO353_11530	0.63	+0.5
2,549,716	+		AO353_11530	0.63	-1.5
2,549,716	+		AO353_11530	0.63	-0.2
2,549,716	+		AO353_11530	0.63	-1.9
2,549,716	+		AO353_11530	0.63	-0.2
2,549,716	+		AO353_11530	0.63	-1.1
2,549,717	-		AO353_11530	0.63	-0.1
2,549,717	-		AO353_11530	0.63	-0.1
2,549,717	-		AO353_11530	0.63	-1.1
2,550,142	+		AO353_11530	0.85	+0.4
2,550,162	+		AO353_11530	0.86	-0.8
2,550,162	+		AO353_11530	0.86	-1.0
2,550,162	+		AO353_11530	0.86	+0.1
2,550,162	+		AO353_11530	0.86	-1.9
2,550,162	+		AO353_11530	0.86	-0.3
2,550,163	-		AO353_11530	0.86	-1.8
2,550,163	-		AO353_11530	0.86	-0.7
2,550,163	-		AO353_11530	0.86	+1.1
2,550,163	-		AO353_11530	0.86	+0.6
2,550,163	-		AO353_11530	0.86	-2.4
2,550,163	-		AO353_11530	0.86	+2.7
2,550,163	-		AO353_11530	0.86	-0.9
2,550,163	-		AO353_11530	0.86	-0.7
2,550,163	-		AO353_11530	0.86	-0.7
2,550,506	-				-2.2
2,550,506	-				+0.0
2,550,506	-				-1.4
2,550,524	-				+0.1
2,550,631	-				-0.6
2,550,673	+				-0.4
2,550,673	+				-2.2
2,550,673	+				+0.5
2,550,673	+				-0.5
2,550,673	+				+0.8
2,550,673	+				+0.4
2,550,673	+				-0.9
2,550,673	+				-0.3
2,550,673	+				-1.0
2,550,673	+				-0.7
2,550,673	+				-0.8
2,550,673	+				-0.5
2,550,673	+				+0.5
2,550,673	+				+1.2
2,550,673	+				+0.8
2,550,673	+				-1.0
2,550,673	+				-1.0
2,550,673	+				-2.4
2,550,673	+				-0.4
2,550,673	+				-0.3
2,550,673	+				-0.7
2,550,673	+				-0.4
2,550,673	+				-0.4
2,550,673	+				-0.2
2,550,673	+				-0.9
2,550,674	-				+0.5
2,550,674	-				-1.6
2,550,674	-				-0.4
2,550,674	-				-0.0
2,550,674	-				-0.8
2,550,674	-				-1.4
2,550,674	-				-0.1
2,550,674	-				-0.5
2,550,674	-				+1.2
2,550,674	-				-0.4
2,550,674	-				+0.9
2,550,674	-				-0.3
2,550,674	-				-0.1
2,550,674	-				+0.9
2,550,676	+				+1.4
2,550,676	+				-0.7
2,550,677	-				-2.5
2,550,677	-				-0.4
2,550,693	-				+1.5
2,550,753	+				-0.6
2,550,753	+				+0.1
2,550,753	+				-1.8
2,550,753	+				-0.7
2,550,753	+				+0.6
2,550,753	+				-0.2
2,550,753	+				-0.4
2,550,753	+				+1.5
2,550,753	+				-0.8
2,550,753	+				-1.0
2,550,753	+				-1.4
2,550,753	+				-1.6
2,550,754	-				+0.6
2,550,754	-				-0.2
2,550,754	-				-0.6
2,550,754	-				+0.1
2,550,754	-				-0.5
2,550,754	-				+1.6
2,550,757	+				+1.6
2,550,757	+				-1.4
2,550,834	+		AO353_11535	0.51	-0.4
2,550,928	+				-0.1
2,550,928	+				-0.0
2,550,928	+				-0.2
2,550,929	-				-1.1
2,550,960	+				+0.2
2,550,960	+				+0.3
2,550,961	-				-0.1
2,550,961	-				-0.7
2,551,073	+				-0.6
2,551,073	+				+0.4
2,551,073	+				-1.1
2,551,073	+				-0.4
2,551,073	+				-0.2
2,551,074	-				-1.4
2,551,074	-				-0.2
2,551,074	-				-0.1
2,551,074	-				-0.2
2,551,074	-				+0.1
2,551,074	-				-0.5
2,551,094	+				+0.4
2,551,095	-				+0.4
2,551,115	+		AO353_11540	0.12	+0.9
2,551,115	+		AO353_11540	0.12	+0.0
2,551,116	-		AO353_11540	0.12	+0.7
2,551,116	-		AO353_11540	0.12	+0.7
2,551,124	+		AO353_11540	0.12	+1.1
2,551,124	+		AO353_11540	0.12	-0.7
2,551,124	+		AO353_11540	0.12	-0.9
2,551,124	+		AO353_11540	0.12	+0.3
2,551,125	-		AO353_11540	0.13	-1.1
2,551,125	-		AO353_11540	0.13	+1.4
2,551,125	-		AO353_11540	0.13	-0.6
2,551,125	-		AO353_11540	0.13	-0.6
2,551,125	-		AO353_11540	0.13	+0.4
2,551,125	-		AO353_11540	0.13	-0.9
2,551,349	+		AO353_11540	0.35	+0.2
2,551,349	+		AO353_11540	0.35	+0.4
2,551,350	-		AO353_11540	0.35	-0.8
2,551,350	-		AO353_11540	0.35	-1.2