Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0703 and BT0704 are separated by 50 nucleotides BT0704 and BT0705 are separated by 89 nucleotides
BT0703: BT0703 - hypothetical protein (NCBI ptt file), at 876,220 to 877,443
BT0703
BT0704: BT0704 - phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file), at 877,494 to 878,660
BT0704
BT0705: BT0705 - hypothetical protein (NCBI ptt file), at 878,750 to 879,697
BT0705
Position (kb) 877
878
879 Strain fitness (log2 ratio) -2
-1
0
1
2 at 876.559 kb on + strand, within BT0703 at 876.673 kb on + strand, within BT0703 at 876.673 kb on + strand, within BT0703 at 876.706 kb on + strand, within BT0703 at 876.725 kb on - strand, within BT0703 at 876.729 kb on - strand, within BT0703 at 876.853 kb on + strand, within BT0703 at 876.927 kb on + strand, within BT0703 at 876.927 kb on + strand, within BT0703 at 876.928 kb on - strand, within BT0703 at 877.112 kb on + strand, within BT0703 at 877.115 kb on - strand, within BT0703 at 877.115 kb on - strand, within BT0703 at 877.239 kb on + strand, within BT0703 at 877.284 kb on + strand, within BT0703 at 877.319 kb on + strand, within BT0703 at 877.434 kb on - strand at 877.454 kb on + strand at 877.454 kb on + strand at 877.460 kb on - strand at 877.607 kb on + strand at 877.608 kb on - strand at 877.709 kb on - strand, within BT0704 at 877.998 kb on + strand, within BT0704 at 878.520 kb on + strand, within BT0704 at 878.575 kb on + strand at 878.576 kb on - strand at 878.655 kb on + strand at 878.658 kb on + strand at 878.697 kb on + strand at 878.740 kb on - strand at 878.748 kb on + strand at 878.785 kb on + strand at 878.786 kb on - strand at 878.786 kb on - strand at 878.796 kb on + strand at 878.818 kb on + strand at 878.897 kb on - strand, within BT0705 at 878.951 kb on - strand, within BT0705 at 879.141 kb on + strand, within BT0705 at 879.258 kb on - strand, within BT0705 at 879.321 kb on - strand, within BT0705 at 879.338 kb on - strand, within BT0705 at 879.409 kb on + strand, within BT0705 at 879.411 kb on + strand, within BT0705 at 879.411 kb on + strand, within BT0705 at 879.412 kb on - strand, within BT0705 at 879.457 kb on - strand, within BT0705 at 879.548 kb on + strand, within BT0705 at 879.548 kb on + strand, within BT0705 at 879.549 kb on - strand, within BT0705
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 876,559 + BT0703 0.28 +0.9 876,673 + BT0703 0.37 -0.6 876,673 + BT0703 0.37 -1.9 876,706 + BT0703 0.40 -1.4 876,725 - BT0703 0.41 +0.1 876,729 - BT0703 0.42 +0.4 876,853 + BT0703 0.52 -1.1 876,927 + BT0703 0.58 +1.8 876,927 + BT0703 0.58 -2.6 876,928 - BT0703 0.58 +0.7 877,112 + BT0703 0.73 +0.2 877,115 - BT0703 0.73 -0.8 877,115 - BT0703 0.73 -0.9 877,239 + BT0703 0.83 -1.7 877,284 + BT0703 0.87 +0.4 877,319 + BT0703 0.90 -0.6 877,434 - -0.1 877,454 + +0.4 877,454 + -0.1 877,460 - +0.7 877,607 + +0.4 877,608 - -0.6 877,709 - BT0704 0.18 -2.3 877,998 + BT0704 0.43 -2.5 878,520 + BT0704 0.88 -1.7 878,575 + +0.9 878,576 - +0.0 878,655 + +1.4 878,658 + -1.1 878,697 + -0.9 878,740 - +1.0 878,748 + -1.4 878,785 + -0.9 878,786 - +1.0 878,786 - +0.4 878,796 + -0.7 878,818 + -1.1 878,897 - BT0705 0.16 -1.1 878,951 - BT0705 0.21 -1.7 879,141 + BT0705 0.41 +0.1 879,258 - BT0705 0.54 +0.4 879,321 - BT0705 0.60 -0.9 879,338 - BT0705 0.62 +0.4 879,409 + BT0705 0.70 -0.7 879,411 + BT0705 0.70 +0.7 879,411 + BT0705 0.70 -0.3 879,412 - BT0705 0.70 -2.6 879,457 - BT0705 0.75 -1.1 879,548 + BT0705 0.84 +2.4 879,548 + BT0705 0.84 +0.2 879,549 - BT0705 0.84 +1.2
Or see this region's nucleotide sequence