Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08715

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,630,419	-		MMP_RS08705	0.87	+0.7
1,630,420	+		MMP_RS08705	0.88	+0.1
1,630,488	-				+0.1
1,630,492	+				-0.2
1,630,521	+				+0.2
1,630,609	-				-1.1
1,630,610	+				-0.6
1,630,626	-				-1.4
1,630,626	-				-0.9
1,630,627	+				+0.6
1,630,627	+				-1.3
1,630,627	+				-1.5
1,630,652	-				-0.4
1,630,655	+				-0.8
1,630,661	-				-1.1
1,630,997	+				-1.9
1,630,999	+				-1.1
1,631,132	-				-1.4
1,631,149	-				-0.3
1,631,168	-				+0.3
1,631,180	+				-0.0
1,631,215	-				+0.3
1,631,216	+				-0.1
1,631,216	+				+0.1
1,631,265	+				+0.5
1,631,282	-				-0.3
1,631,287	-				+0.0
1,631,579	+		MMP_RS08715	0.16	-2.8
1,631,827	+		MMP_RS08715	0.35	-1.2
1,631,829	-		MMP_RS08715	0.35	-1.8
1,632,471	+		MMP_RS08715	0.84	-3.4
1,632,652	-				-1.5
1,632,782	-				-1.3
1,633,411	+		MMP_RS08720	0.59	-2.9
1,633,412	-		MMP_RS08720	0.60	-0.8
1,633,668	-		MMP_RS08720	0.81	-2.3