Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05815

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,115,091	-				-1.1
1,115,512	-				-0.3
1,115,524	-				+0.1
1,115,525	+				+0.4
1,115,531	-				+0.0
1,115,531	-				-0.3
1,115,531	-				-0.3
1,115,531	-				+0.1
1,115,532	+				-0.1
1,115,532	+				+0.6
1,115,532	+				-0.2
1,115,532	+				+0.6
1,115,532	+				-0.3
1,115,532	+				-0.2
1,115,532	+				+0.3
1,115,553	+				-0.3
1,115,572	+				-1.2
1,115,595	+				-0.1
1,115,604	-				+0.0
1,115,605	+		MMP_RS05810	0.10	+0.2
1,115,609	+		MMP_RS05810	0.11	+0.3
1,115,616	-		MMP_RS05810	0.12	-0.4
1,115,616	-		MMP_RS05810	0.12	+0.1
1,115,617	+		MMP_RS05810	0.13	-0.6
1,115,617	+		MMP_RS05810	0.13	+0.2
1,115,618	-		MMP_RS05810	0.13	+0.3
1,115,618	-		MMP_RS05810	0.13	-0.1
1,115,624	+		MMP_RS05810	0.14	+0.6
1,115,630	-		MMP_RS05810	0.15	-0.0
1,115,631	+		MMP_RS05810	0.16	-0.6
1,115,664	-		MMP_RS05810	0.23	-0.1
1,115,684	-		MMP_RS05810	0.27	+0.3
1,115,732	-		MMP_RS05810	0.37	+0.3
1,115,733	+		MMP_RS05810	0.37	-0.0
1,115,733	+		MMP_RS05810	0.37	+1.1
1,115,746	+		MMP_RS05810	0.40	-0.2
1,115,809	+		MMP_RS05810	0.53	+0.1
1,115,810	-		MMP_RS05810	0.53	+0.3
1,115,810	-		MMP_RS05810	0.53	+0.0
1,115,811	+		MMP_RS05810	0.54	-0.5
1,115,811	+		MMP_RS05810	0.54	+0.1
1,115,867	-		MMP_RS05810	0.65	+0.1
1,115,873	-		MMP_RS05810	0.67	+0.1
1,115,875	-		MMP_RS05810	0.67	+0.1
1,115,876	+		MMP_RS05810	0.67	-0.1
1,115,876	+		MMP_RS05810	0.67	+1.2
1,115,889	+		MMP_RS05810	0.70	+0.1
1,115,889	+		MMP_RS05810	0.70	+0.5
1,115,905	+		MMP_RS05810	0.73	+0.1
1,115,906	-		MMP_RS05810	0.74	-0.3
1,116,029	+				-0.2
1,116,048	+				-0.3
1,116,055	-				-1.8
1,116,192	-		MMP_RS05815	0.14	-2.0
1,116,193	+		MMP_RS05815	0.14	-0.1
1,116,680	-		MMP_RS05815	0.75	-1.1
1,116,909	+				-0.0
1,116,909	+				+0.4
1,117,142	-				-0.2
1,117,543	+		MMP_RS05820	0.28	+0.1
1,117,552	+		MMP_RS05820	0.29	+0.8
1,117,597	-		MMP_RS05820	0.31	+0.0
1,117,727	+		MMP_RS05820	0.37	+0.1