Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05515

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,057,509	+		MMP_RS05505	0.48	-0.4
1,057,590	-		MMP_RS05505	0.62	-0.1
1,057,595	-		MMP_RS05505	0.63	-0.4
1,057,595	-		MMP_RS05505	0.63	-0.3
1,057,595	-		MMP_RS05505	0.63	-0.1
1,057,595	-		MMP_RS05505	0.63	+0.5
1,057,596	+		MMP_RS05505	0.63	+0.2
1,057,596	+		MMP_RS05505	0.63	-0.4
1,057,675	-		MMP_RS05505	0.77	-0.3
1,057,676	+		MMP_RS05505	0.77	-0.2
1,057,689	+		MMP_RS05505	0.80	-0.2
1,057,787	+				-0.0
1,058,125	-		MMP_RS05510	0.75	-0.6
1,058,125	-		MMP_RS05510	0.75	-0.9
1,058,126	+		MMP_RS05510	0.75	-1.0
1,058,126	+		MMP_RS05510	0.75	-0.9
1,058,129	-		MMP_RS05510	0.76	-0.7
1,058,130	+		MMP_RS05510	0.76	-1.2
1,058,193	+				-1.4
1,058,202	+				-0.5
1,058,264	-				-0.6
1,058,282	-				-2.1
1,058,286	-				-1.5
1,058,286	-				-2.0
1,058,310	-				-1.9
1,058,314	-				-1.2
1,058,314	-				-1.3
1,058,319	-				-1.2
1,058,349	-				-2.2
1,058,434	+		MMP_RS05515	0.19	-2.9
1,058,482	+		MMP_RS05515	0.30	-3.1
1,058,533	+		MMP_RS05515	0.41	-3.2
1,058,619	+		MMP_RS05515	0.60	-2.5
1,058,648	+		MMP_RS05515	0.66	-2.4
1,058,648	+		MMP_RS05515	0.66	-2.3
1,058,718	+		MMP_RS05515	0.81	-2.3
1,058,973	+				-0.3
1,058,998	-				-1.6
1,059,177	-				-1.9
1,059,192	+				-0.0
1,059,236	+				-0.9
1,059,257	-				-1.0
1,059,424	-				+1.4
1,059,543	+				-0.7
1,059,697	+				-0.2
1,059,697	+				-3.0
1,059,741	-				-2.9
1,059,749	-				-0.5