Strain Fitness in Dechlorosoma suillum PS around Dsui_3330
Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Zinc 1 mM |
---|---|---|---|---|---|
remove | |||||
3,568,424 | + | Dsui_3328 | 0.15 | +0.6 | |
3,568,526 | + | Dsui_3328 | 0.37 | -1.7 | |
3,568,568 | - | Dsui_3328 | 0.46 | -0.2 | |
3,568,568 | - | Dsui_3328 | 0.46 | -0.1 | |
3,568,590 | + | Dsui_3328 | 0.51 | -0.4 | |
3,568,653 | - | Dsui_3328 | 0.64 | -0.5 | |
3,568,663 | - | Dsui_3328 | 0.66 | +0.2 | |
3,568,686 | + | Dsui_3328 | 0.71 | +0.6 | |
3,568,748 | - | Dsui_3328 | 0.84 | -0.1 | |
3,568,780 | - | +0.2 | |||
3,568,804 | - | -0.1 | |||
3,568,804 | - | +0.1 | |||
3,568,810 | - | -0.3 | |||
3,568,861 | + | -2.7 | |||
3,568,905 | + | -1.7 | |||
3,569,079 | - | -0.1 | |||
3,569,095 | + | +0.6 | |||
3,569,174 | + | Dsui_3329 | 0.35 | -0.4 | |
3,569,230 | + | Dsui_3329 | 0.52 | -2.4 | |
3,569,252 | - | Dsui_3329 | 0.59 | +0.1 | |
3,569,321 | + | Dsui_3329 | 0.81 | -0.4 | |
3,569,321 | + | Dsui_3329 | 0.81 | -2.2 | |
3,569,321 | + | Dsui_3329 | 0.81 | +0.6 | |
3,569,321 | + | Dsui_3329 | 0.81 | -0.4 | |
3,569,329 | - | Dsui_3329 | 0.83 | -0.2 | |
3,569,329 | - | Dsui_3329 | 0.83 | -0.0 | |
3,569,336 | + | Dsui_3329 | 0.86 | -1.4 | |
3,569,344 | - | Dsui_3329 | 0.88 | -0.3 | |
3,569,389 | + | -1.0 | |||
3,569,442 | - | -0.1 | |||
3,569,458 | + | Dsui_3330 | 0.16 | +0.6 | |
3,569,581 | + | Dsui_3330 | 0.63 | -1.0 | |
3,569,593 | + | Dsui_3330 | 0.68 | -2.0 | |
3,569,673 | - | -0.2 |
Or see this region's nucleotide sequence