Strain Fitness in Dechlorosoma suillum PS around Dsui_3090
Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Zinc 1 mM |
---|---|---|---|---|---|
remove | |||||
3,308,233 | + | +0.5 | |||
3,308,247 | + | -2.3 | |||
3,308,249 | - | -2.5 | |||
3,308,297 | + | +0.3 | |||
3,308,459 | + | -0.2 | |||
3,308,467 | - | -1.1 | |||
3,308,587 | + | Dsui_3090 | 0.34 | +0.2 | |
3,308,620 | + | Dsui_3090 | 0.46 | +0.5 | |
3,308,628 | - | +0.5 | |||
3,308,662 | - | -0.5 | |||
3,308,854 | - | +0.5 | |||
3,308,857 | - | -1.1 | |||
3,308,866 | + | +2.5 | |||
3,308,903 | + | Dsui_3091 | 0.13 | +1.5 | |
3,308,903 | + | Dsui_3091 | 0.13 | +0.1 | |
3,308,911 | - | -1.1 | |||
3,308,925 | + | Dsui_3091 | 0.15 | -1.1 | |
3,308,931 | + | Dsui_3091 | 0.16 | +0.5 | |
3,309,061 | + | Dsui_3091 | 0.29 | +0.2 | |
3,309,115 | + | Dsui_3091 | 0.35 | +0.0 | |
3,309,147 | + | Dsui_3091 | 0.38 | +1.5 | |
3,309,212 | - | +0.5 | |||
3,309,235 | + | Dsui_3091 | 0.47 | +0.6 | |
3,309,489 | - | +0.5 | |||
3,309,538 | - | Dsui_3091 | 0.78 | +0.6 | |
3,309,592 | - | Dsui_3091 | 0.84 | +0.5 | |
3,309,612 | + | Dsui_3091 | 0.86 | -0.5 |
Or see this region's nucleotide sequence