Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2963 and Dsui_2964 are separated by 3 nucleotides Dsui_2964 and Dsui_2965 are separated by 28 nucleotides Dsui_2965 and Dsui_2966 overlap by 4 nucleotides Dsui_2966 and Dsui_2967 are separated by 41 nucleotides
Dsui_2963: Dsui_2963 - precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit, at 3,170,916 to 3,172,208
_2963
Dsui_2964: Dsui_2964 - precorrin-2 C20-methyltransferase, at 3,172,212 to 3,173,012
_2964
Dsui_2965: Dsui_2965 - cobalamin biosynthesis protein CbiG, at 3,173,041 to 3,173,826
_2965
Dsui_2966: Dsui_2966 - cobalamin biosynthesis protein CbiG, at 3,173,823 to 3,174,230
_2966
Dsui_2967: Dsui_2967 - precorrin-3B C17-methyltransferase, at 3,174,272 to 3,175,267
_2967
Position (kb)
3173
3174 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3172.068 kb on + strand, within Dsui_2963 at 3172.129 kb on + strand at 3172.210 kb on - strand at 3172.359 kb on - strand, within Dsui_2964 at 3172.381 kb on + strand, within Dsui_2964 at 3172.498 kb on + strand, within Dsui_2964 at 3172.603 kb on - strand at 3172.668 kb on + strand, within Dsui_2964 at 3172.808 kb on + strand, within Dsui_2964 at 3172.914 kb on - strand, within Dsui_2964 at 3173.016 kb on + strand at 3173.501 kb on + strand, within Dsui_2965 at 3173.693 kb on - strand at 3173.707 kb on + strand, within Dsui_2965 at 3173.710 kb on - strand, within Dsui_2965 at 3173.829 kb on - strand at 3173.940 kb on - strand at 3173.965 kb on + strand, within Dsui_2966 at 3173.965 kb on + strand, within Dsui_2966 at 3174.018 kb on + strand, within Dsui_2966 at 3174.021 kb on - strand at 3174.057 kb on + strand, within Dsui_2966 at 3174.299 kb on + strand at 3174.306 kb on - strand at 3174.476 kb on + strand, within Dsui_2967 at 3174.505 kb on - strand, within Dsui_2967 at 3174.505 kb on - strand, within Dsui_2967 at 3174.694 kb on - strand at 3174.777 kb on - strand at 3174.791 kb on + strand, within Dsui_2967 at 3174.796 kb on + strand, within Dsui_2967 at 3174.802 kb on + strand, within Dsui_2967 at 3174.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 3,172,068 + Dsui_2963 0.89 -0.1 3,172,129 + -1.8 3,172,210 - -0.5 3,172,359 - Dsui_2964 0.18 -0.5 3,172,381 + Dsui_2964 0.21 +0.5 3,172,498 + Dsui_2964 0.36 +1.3 3,172,603 - +0.5 3,172,668 + Dsui_2964 0.57 +0.5 3,172,808 + Dsui_2964 0.74 -1.3 3,172,914 - Dsui_2964 0.88 -0.5 3,173,016 + -0.2 3,173,501 + Dsui_2965 0.59 -2.9 3,173,693 - +0.5 3,173,707 + Dsui_2965 0.85 -3.1 3,173,710 - Dsui_2965 0.85 +0.5 3,173,829 - -0.5 3,173,940 - +0.5 3,173,965 + Dsui_2966 0.35 -1.5 3,173,965 + Dsui_2966 0.35 -1.0 3,174,018 + Dsui_2966 0.48 +0.1 3,174,021 - -0.5 3,174,057 + Dsui_2966 0.57 -1.0 3,174,299 + -0.5 3,174,306 - +0.5 3,174,476 + Dsui_2967 0.20 -0.1 3,174,505 - Dsui_2967 0.23 -0.5 3,174,505 - Dsui_2967 0.23 +0.5 3,174,694 - +0.5 3,174,777 - +0.5 3,174,791 + Dsui_2967 0.52 +0.5 3,174,796 + Dsui_2967 0.53 +0.5 3,174,802 + Dsui_2967 0.53 -1.1 3,174,805 - +0.5
Or see this region's nucleotide sequence