Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2802 and Dsui_2803 are separated by 82 nucleotides Dsui_2803 and Dsui_2804 are separated by 42 nucleotides Dsui_2804 and Dsui_2805 are separated by 40 nucleotides Dsui_2805 and Dsui_2806 are separated by 53 nucleotides
Dsui_2802: Dsui_2802 - flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family, at 2,973,062 to 2,974,330
_2802
Dsui_2803: Dsui_2803 - GGDEF domain-containing protein, at 2,974,413 to 2,974,898
_2803
Dsui_2804: Dsui_2804 - diguanylate cyclase (GGDEF) domain-containing protein, at 2,974,941 to 2,976,557
_2804
Dsui_2805: Dsui_2805 - EamA-like transporter family, at 2,976,598 to 2,977,467
_2805
Dsui_2806: Dsui_2806 - PAS domain S-box, at 2,977,521 to 2,980,562
_2806
Position (kb)
2974
2975
2976
2977 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2974.063 kb on + strand, within Dsui_2802 at 2974.112 kb on + strand, within Dsui_2802 at 2974.181 kb on + strand, within Dsui_2802 at 2974.210 kb on - strand at 2974.257 kb on - strand at 2974.273 kb on + strand at 2974.277 kb on + strand at 2974.290 kb on + strand at 2974.298 kb on - strand at 2974.408 kb on + strand at 2974.534 kb on + strand, within Dsui_2803 at 2974.536 kb on + strand, within Dsui_2803 at 2974.539 kb on - strand at 2974.561 kb on + strand, within Dsui_2803 at 2974.576 kb on + strand, within Dsui_2803 at 2974.603 kb on + strand, within Dsui_2803 at 2974.686 kb on + strand, within Dsui_2803 at 2974.695 kb on + strand, within Dsui_2803 at 2974.763 kb on - strand, within Dsui_2803 at 2974.777 kb on + strand, within Dsui_2803 at 2974.785 kb on - strand, within Dsui_2803 at 2974.785 kb on - strand, within Dsui_2803 at 2974.800 kb on - strand, within Dsui_2803 at 2974.803 kb on + strand, within Dsui_2803 at 2974.805 kb on - strand, within Dsui_2803 at 2974.863 kb on + strand at 2974.865 kb on - strand at 2975.124 kb on - strand, within Dsui_2804 at 2975.145 kb on + strand, within Dsui_2804 at 2975.205 kb on - strand, within Dsui_2804 at 2975.350 kb on + strand at 2975.358 kb on - strand, within Dsui_2804 at 2975.445 kb on + strand, within Dsui_2804 at 2975.445 kb on + strand at 2975.779 kb on + strand at 2975.793 kb on - strand, within Dsui_2804 at 2975.999 kb on - strand, within Dsui_2804 at 2976.163 kb on - strand, within Dsui_2804 at 2976.168 kb on - strand, within Dsui_2804 at 2976.410 kb on + strand at 2976.507 kb on + strand at 2976.537 kb on - strand at 2976.539 kb on + strand at 2976.539 kb on + strand at 2976.819 kb on - strand, within Dsui_2805 at 2976.963 kb on - strand, within Dsui_2805 at 2977.097 kb on - strand, within Dsui_2805 at 2977.433 kb on + strand at 2977.433 kb on + strand at 2977.441 kb on - strand at 2977.441 kb on - strand at 2977.451 kb on - strand at 2977.487 kb on + strand at 2977.490 kb on - strand at 2977.518 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 2,974,063 + Dsui_2802 0.79 -0.3 2,974,112 + Dsui_2802 0.83 -0.0 2,974,181 + Dsui_2802 0.88 -1.3 2,974,210 - +0.6 2,974,257 - +0.6 2,974,273 + +2.2 2,974,277 + -0.3 2,974,290 + -0.2 2,974,298 - -0.4 2,974,408 + -0.4 2,974,534 + Dsui_2803 0.25 -0.6 2,974,536 + Dsui_2803 0.25 -0.3 2,974,539 - +0.6 2,974,561 + Dsui_2803 0.30 -0.1 2,974,576 + Dsui_2803 0.34 -1.6 2,974,603 + Dsui_2803 0.39 -0.6 2,974,686 + Dsui_2803 0.56 +0.6 2,974,695 + Dsui_2803 0.58 +0.1 2,974,763 - Dsui_2803 0.72 -0.9 2,974,777 + Dsui_2803 0.75 -0.0 2,974,785 - Dsui_2803 0.77 -2.2 2,974,785 - Dsui_2803 0.77 -2.2 2,974,800 - Dsui_2803 0.80 -1.7 2,974,803 + Dsui_2803 0.80 +1.1 2,974,805 - Dsui_2803 0.81 +0.6 2,974,863 + -0.4 2,974,865 - +0.6 2,975,124 - Dsui_2804 0.11 +0.2 2,975,145 + Dsui_2804 0.13 -0.4 2,975,205 - Dsui_2804 0.16 +0.5 2,975,350 + +0.7 2,975,358 - Dsui_2804 0.26 +0.1 2,975,445 + Dsui_2804 0.31 +0.7 2,975,445 + +0.7 2,975,779 + -0.3 2,975,793 - Dsui_2804 0.53 -0.1 2,975,999 - Dsui_2804 0.65 -0.0 2,976,163 - Dsui_2804 0.76 -0.1 2,976,168 - Dsui_2804 0.76 +0.4 2,976,410 + -0.3 2,976,507 + -0.3 2,976,537 - -0.3 2,976,539 + +0.7 2,976,539 + -0.3 2,976,819 - Dsui_2805 0.25 -0.9 2,976,963 - Dsui_2805 0.42 -2.5 2,977,097 - Dsui_2805 0.57 -0.5 2,977,433 + -1.6 2,977,433 + -0.3 2,977,441 - -0.3 2,977,441 - -0.3 2,977,451 - -2.3 2,977,487 + +0.7 2,977,490 - +2.7 2,977,518 - +0.2
Or see this region's nucleotide sequence