Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2677 and Dsui_2678 are separated by 85 nucleotides Dsui_2678 and Dsui_2679 are separated by 117 nucleotides Dsui_2679 and Dsui_2680 are separated by 3 nucleotides
Dsui_2677: Dsui_2677 - phosphoenolpyruvate synthase, at 2,828,221 to 2,830,596
_2677
Dsui_2678: Dsui_2678 - hypothetical protein, at 2,830,682 to 2,831,524
_2678
Dsui_2679: Dsui_2679 - rRNA methylase, at 2,831,642 to 2,832,418
_2679
Dsui_2680: Dsui_2680 - ribonuclease HII, at 2,832,422 to 2,833,018
_2680
Position (kb)
2830
2831
2832 Strain fitness (log2 ratio)
-2
-1
0
1 at 2830.644 kb on - strand at 2830.649 kb on + strand at 2830.649 kb on + strand at 2830.657 kb on - strand at 2830.657 kb on - strand at 2830.686 kb on + strand at 2830.766 kb on - strand at 2830.772 kb on - strand, within Dsui_2678 at 2830.776 kb on - strand at 2830.783 kb on + strand, within Dsui_2678 at 2830.783 kb on + strand, within Dsui_2678 at 2830.787 kb on - strand, within Dsui_2678 at 2830.791 kb on - strand at 2830.798 kb on + strand, within Dsui_2678 at 2830.804 kb on - strand at 2830.843 kb on - strand, within Dsui_2678 at 2830.847 kb on - strand, within Dsui_2678 at 2830.887 kb on + strand, within Dsui_2678 at 2830.920 kb on + strand, within Dsui_2678 at 2830.948 kb on + strand, within Dsui_2678 at 2830.980 kb on + strand, within Dsui_2678 at 2830.988 kb on - strand, within Dsui_2678 at 2831.028 kb on + strand, within Dsui_2678 at 2831.277 kb on + strand, within Dsui_2678 at 2831.406 kb on - strand at 2831.442 kb on + strand at 2831.442 kb on + strand at 2831.450 kb on - strand at 2831.540 kb on + strand at 2831.628 kb on - strand at 2831.703 kb on - strand at 2831.704 kb on - strand at 2831.732 kb on - strand, within Dsui_2679 at 2831.795 kb on - strand, within Dsui_2679 at 2831.889 kb on + strand at 2831.961 kb on + strand, within Dsui_2679 at 2831.969 kb on - strand, within Dsui_2679 at 2831.974 kb on - strand, within Dsui_2679 at 2832.060 kb on + strand, within Dsui_2679 at 2832.062 kb on + strand, within Dsui_2679 at 2832.114 kb on + strand, within Dsui_2679 at 2832.179 kb on + strand, within Dsui_2679 at 2832.179 kb on + strand, within Dsui_2679 at 2832.187 kb on - strand, within Dsui_2679 at 2832.201 kb on - strand, within Dsui_2679 at 2832.234 kb on + strand, within Dsui_2679 at 2832.247 kb on - strand, within Dsui_2679 at 2832.347 kb on + strand at 2832.420 kb on + strand at 2832.420 kb on + strand at 2832.428 kb on - strand at 2832.443 kb on - strand at 2832.460 kb on + strand at 2832.492 kb on - strand, within Dsui_2680 at 2832.523 kb on + strand, within Dsui_2680
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 2,830,644 - -1.1 2,830,649 + -1.4 2,830,649 + -0.4 2,830,657 - +0.6 2,830,657 - +0.6 2,830,686 + +0.2 2,830,766 - -0.4 2,830,772 - Dsui_2678 0.11 +0.6 2,830,776 - +0.6 2,830,783 + Dsui_2678 0.12 +0.2 2,830,783 + Dsui_2678 0.12 +0.1 2,830,787 - Dsui_2678 0.12 -1.0 2,830,791 - +0.6 2,830,798 + Dsui_2678 0.14 +0.2 2,830,804 - +0.6 2,830,843 - Dsui_2678 0.19 -1.4 2,830,847 - Dsui_2678 0.20 -2.2 2,830,887 + Dsui_2678 0.24 -0.1 2,830,920 + Dsui_2678 0.28 +0.0 2,830,948 + Dsui_2678 0.32 +0.5 2,830,980 + Dsui_2678 0.35 +0.2 2,830,988 - Dsui_2678 0.36 -1.4 2,831,028 + Dsui_2678 0.41 +0.4 2,831,277 + Dsui_2678 0.71 +0.5 2,831,406 - +0.6 2,831,442 + -0.0 2,831,442 + +0.0 2,831,450 - -1.4 2,831,540 + -0.1 2,831,628 - -0.3 2,831,703 - -0.3 2,831,704 - -0.4 2,831,732 - Dsui_2679 0.12 +0.2 2,831,795 - Dsui_2679 0.20 -0.1 2,831,889 + -1.0 2,831,961 + Dsui_2679 0.41 -1.0 2,831,969 - Dsui_2679 0.42 +0.1 2,831,974 - Dsui_2679 0.43 -0.9 2,832,060 + Dsui_2679 0.54 +0.6 2,832,062 + Dsui_2679 0.54 -1.0 2,832,114 + Dsui_2679 0.61 +0.6 2,832,179 + Dsui_2679 0.69 +0.6 2,832,179 + Dsui_2679 0.69 -1.0 2,832,187 - Dsui_2679 0.70 -0.6 2,832,201 - Dsui_2679 0.72 +0.2 2,832,234 + Dsui_2679 0.76 -1.0 2,832,247 - Dsui_2679 0.78 -0.8 2,832,347 + -1.7 2,832,420 + -0.4 2,832,420 + +0.6 2,832,428 - -0.0 2,832,443 - -0.1 2,832,460 + +0.6 2,832,492 - Dsui_2680 0.12 +0.3 2,832,523 + Dsui_2680 0.17 +0.6
Or see this region's nucleotide sequence