Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2493 and Dsui_2494 are separated by 71 nucleotides Dsui_2494 and Dsui_2495 are separated by 15 nucleotides Dsui_2495 and Dsui_2496 are separated by 2 nucleotides Dsui_2496 and Dsui_2497 overlap by 4 nucleotides Dsui_2497 and Dsui_2498 are separated by 16 nucleotides Dsui_2498 and Dsui_2499 overlap by 4 nucleotides Dsui_2499 and Dsui_2500 are separated by 52 nucleotides
Dsui_2493: Dsui_2493 - Hg(II)-responsive transcriptional regulator, at 2,643,733 to 2,644,167
_2493
Dsui_2494: Dsui_2494 - MerT mercuric transport protein, at 2,644,239 to 2,644,589
_2494
Dsui_2495: Dsui_2495 - mercuric transport protein periplasmic component, at 2,644,605 to 2,644,880
_2495
Dsui_2496: Dsui_2496 - Membrane transport protein MerF, at 2,644,883 to 2,645,128
_2496
Dsui_2497: Dsui_2497 - mercuric reductase, at 2,645,125 to 2,646,771
_2497
Dsui_2498: Dsui_2498 - mercuric resistance transcriptional repressor protein MerD, at 2,646,788 to 2,647,153
_2498
Dsui_2499: Dsui_2499 - MerE protein, at 2,647,150 to 2,647,386
_2499
Dsui_2500: Dsui_2500 - site-specific recombinase, DNA invertase Pin, at 2,647,439 to 2,648,053
_2500
Position (kb)
2645
2646
2647 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2644.210 kb on + strand at 2644.269 kb on + strand at 2644.665 kb on + strand, within Dsui_2495 at 2644.672 kb on + strand, within Dsui_2495 at 2644.674 kb on + strand, within Dsui_2495 at 2644.680 kb on - strand, within Dsui_2495 at 2644.692 kb on + strand, within Dsui_2495 at 2644.700 kb on - strand, within Dsui_2495 at 2644.742 kb on + strand, within Dsui_2495 at 2644.798 kb on + strand, within Dsui_2495 at 2644.801 kb on - strand at 2644.809 kb on + strand, within Dsui_2495 at 2644.832 kb on + strand, within Dsui_2495 at 2644.866 kb on - strand at 2644.869 kb on + strand at 2644.869 kb on + strand at 2644.869 kb on + strand at 2644.877 kb on - strand at 2644.909 kb on + strand, within Dsui_2496 at 2644.953 kb on + strand, within Dsui_2496 at 2645.024 kb on - strand at 2645.084 kb on + strand, within Dsui_2496 at 2645.146 kb on + strand at 2645.146 kb on + strand at 2645.151 kb on + strand at 2645.151 kb on + strand at 2645.213 kb on + strand at 2645.255 kb on - strand at 2645.526 kb on + strand, within Dsui_2497 at 2645.634 kb on + strand, within Dsui_2497 at 2645.634 kb on + strand, within Dsui_2497 at 2645.637 kb on - strand at 2645.736 kb on + strand, within Dsui_2497 at 2645.740 kb on - strand, within Dsui_2497 at 2645.740 kb on - strand at 2645.913 kb on - strand, within Dsui_2497 at 2645.929 kb on + strand, within Dsui_2497 at 2646.027 kb on + strand, within Dsui_2497 at 2646.377 kb on + strand, within Dsui_2497 at 2646.490 kb on - strand, within Dsui_2497 at 2646.803 kb on - strand at 2646.852 kb on + strand, within Dsui_2498 at 2646.876 kb on + strand, within Dsui_2498 at 2646.908 kb on - strand at 2646.908 kb on - strand, within Dsui_2498 at 2646.942 kb on - strand, within Dsui_2498 at 2646.979 kb on - strand, within Dsui_2498 at 2647.155 kb on - strand at 2647.222 kb on + strand, within Dsui_2499 at 2647.227 kb on + strand, within Dsui_2499 at 2647.235 kb on - strand, within Dsui_2499 at 2647.299 kb on + strand, within Dsui_2499 at 2647.307 kb on - strand at 2647.324 kb on - strand at 2647.474 kb on - strand at 2647.692 kb on + strand, within Dsui_2500 at 2647.748 kb on + strand, within Dsui_2500 at 2647.769 kb on + strand, within Dsui_2500
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 2,644,210 + -2.0 2,644,269 + +0.6 2,644,665 + Dsui_2495 0.22 -1.4 2,644,672 + Dsui_2495 0.24 -0.4 2,644,674 + Dsui_2495 0.25 -1.0 2,644,680 - Dsui_2495 0.27 -1.7 2,644,692 + Dsui_2495 0.32 +0.6 2,644,700 - Dsui_2495 0.34 -1.4 2,644,742 + Dsui_2495 0.50 +0.6 2,644,798 + Dsui_2495 0.70 +0.6 2,644,801 - +0.6 2,644,809 + Dsui_2495 0.74 +0.6 2,644,832 + Dsui_2495 0.82 -1.0 2,644,866 - +0.6 2,644,869 + -0.4 2,644,869 + -1.4 2,644,869 + -2.4 2,644,877 - -1.7 2,644,909 + Dsui_2496 0.11 -0.4 2,644,953 + Dsui_2496 0.28 -0.4 2,645,024 - +0.6 2,645,084 + Dsui_2496 0.82 -1.4 2,645,146 + +0.6 2,645,146 + +0.6 2,645,151 + -0.4 2,645,151 + -1.7 2,645,213 + +0.6 2,645,255 - -0.4 2,645,526 + Dsui_2497 0.24 +0.6 2,645,634 + Dsui_2497 0.31 +0.6 2,645,634 + Dsui_2497 0.31 +0.6 2,645,637 - -0.4 2,645,736 + Dsui_2497 0.37 +0.6 2,645,740 - Dsui_2497 0.37 -1.0 2,645,740 - +0.6 2,645,913 - Dsui_2497 0.48 -1.7 2,645,929 + Dsui_2497 0.49 -0.4 2,646,027 + Dsui_2497 0.55 -0.4 2,646,377 + Dsui_2497 0.76 -1.0 2,646,490 - Dsui_2497 0.83 -1.4 2,646,803 - -0.4 2,646,852 + Dsui_2498 0.17 +0.6 2,646,876 + Dsui_2498 0.24 +2.2 2,646,908 - +0.6 2,646,908 - Dsui_2498 0.33 +0.6 2,646,942 - Dsui_2498 0.42 -0.4 2,646,979 - Dsui_2498 0.52 +0.6 2,647,155 - -1.0 2,647,222 + Dsui_2499 0.30 +0.6 2,647,227 + Dsui_2499 0.32 -1.4 2,647,235 - Dsui_2499 0.36 +0.6 2,647,299 + Dsui_2499 0.63 -0.4 2,647,307 - +0.6 2,647,324 - +0.6 2,647,474 - -0.1 2,647,692 + Dsui_2500 0.41 -1.4 2,647,748 + Dsui_2500 0.50 +0.6 2,647,769 + Dsui_2500 0.54 +0.6
Or see this region's nucleotide sequence