Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1902 and Dsui_1903 are separated by 660 nucleotides Dsui_1903 and Dsui_1904 are separated by 611 nucleotides
Dsui_1902: Dsui_1902 - alkyl hydroperoxide reductase, F subunit, at 2,000,980 to 2,002,542
_1902
Dsui_1903: Dsui_1903 - Fe-S oxidoreductase, at 2,003,203 to 2,004,753
_1903
Dsui_1904: Dsui_1904 - aspartate/tyrosine/aromatic aminotransferase, at 2,005,365 to 2,006,561
_1904
Position (kb)
2003
2004
2005 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2002.251 kb on - strand, within Dsui_1902 at 2002.258 kb on - strand, within Dsui_1902 at 2002.329 kb on + strand, within Dsui_1902 at 2002.329 kb on + strand, within Dsui_1902 at 2002.526 kb on + strand at 2002.526 kb on + strand at 2002.526 kb on + strand at 2002.526 kb on + strand at 2002.531 kb on + strand at 2002.531 kb on + strand at 2002.582 kb on - strand at 2002.650 kb on - strand at 2002.650 kb on - strand at 2002.679 kb on - strand at 2002.776 kb on - strand at 2002.776 kb on - strand at 2002.891 kb on + strand at 2002.898 kb on - strand at 2002.919 kb on + strand at 2002.919 kb on + strand at 2002.997 kb on + strand at 2002.997 kb on + strand at 2002.997 kb on + strand at 2002.997 kb on + strand at 2003.005 kb on - strand at 2003.005 kb on - strand at 2003.005 kb on - strand at 2003.005 kb on - strand at 2003.005 kb on - strand at 2003.005 kb on - strand at 2003.005 kb on - strand at 2003.005 kb on - strand at 2003.052 kb on + strand at 2003.067 kb on + strand at 2003.098 kb on + strand at 2003.099 kb on + strand at 2003.099 kb on + strand at 2003.099 kb on + strand at 2003.099 kb on + strand at 2003.099 kb on + strand at 2003.099 kb on + strand at 2003.099 kb on + strand at 2003.107 kb on - strand at 2003.155 kb on + strand at 2003.193 kb on + strand at 2003.193 kb on + strand at 2003.193 kb on + strand at 2003.193 kb on + strand at 2003.193 kb on + strand at 2003.193 kb on + strand at 2003.193 kb on + strand at 2003.193 kb on + strand at 2003.201 kb on - strand at 2003.201 kb on - strand at 2003.201 kb on - strand at 2003.201 kb on - strand at 2003.220 kb on - strand at 2003.221 kb on + strand at 2003.229 kb on - strand at 2003.230 kb on - strand at 2003.234 kb on + strand at 2003.269 kb on - strand at 2003.306 kb on + strand at 2003.324 kb on + strand at 2003.332 kb on - strand at 2003.387 kb on + strand, within Dsui_1903 at 2003.395 kb on + strand, within Dsui_1903 at 2003.395 kb on + strand, within Dsui_1903 at 2003.403 kb on - strand at 2003.403 kb on - strand at 2003.414 kb on + strand, within Dsui_1903 at 2003.414 kb on + strand, within Dsui_1903 at 2003.416 kb on + strand at 2003.424 kb on - strand, within Dsui_1903 at 2003.451 kb on + strand, within Dsui_1903 at 2003.456 kb on + strand at 2003.507 kb on + strand, within Dsui_1903 at 2003.522 kb on + strand, within Dsui_1903 at 2003.534 kb on + strand, within Dsui_1903 at 2003.536 kb on + strand at 2003.542 kb on - strand, within Dsui_1903 at 2003.553 kb on + strand, within Dsui_1903 at 2003.583 kb on + strand, within Dsui_1903 at 2003.588 kb on + strand, within Dsui_1903 at 2003.600 kb on + strand, within Dsui_1903 at 2003.602 kb on + strand, within Dsui_1903 at 2003.602 kb on + strand, within Dsui_1903 at 2003.603 kb on - strand, within Dsui_1903 at 2003.612 kb on + strand, within Dsui_1903 at 2003.620 kb on + strand, within Dsui_1903 at 2003.620 kb on - strand, within Dsui_1903 at 2003.668 kb on - strand, within Dsui_1903 at 2003.673 kb on + strand, within Dsui_1903 at 2003.693 kb on + strand, within Dsui_1903 at 2003.748 kb on - strand, within Dsui_1903 at 2003.763 kb on + strand at 2003.763 kb on + strand, within Dsui_1903 at 2003.763 kb on + strand, within Dsui_1903 at 2003.768 kb on + strand, within Dsui_1903 at 2003.771 kb on - strand, within Dsui_1903 at 2003.773 kb on + strand, within Dsui_1903 at 2003.777 kb on + strand, within Dsui_1903 at 2003.797 kb on + strand, within Dsui_1903 at 2003.826 kb on - strand, within Dsui_1903 at 2003.940 kb on + strand, within Dsui_1903 at 2003.968 kb on + strand, within Dsui_1903 at 2003.973 kb on + strand, within Dsui_1903 at 2003.973 kb on + strand, within Dsui_1903 at 2003.976 kb on - strand, within Dsui_1903 at 2003.981 kb on - strand, within Dsui_1903 at 2004.086 kb on - strand, within Dsui_1903 at 2004.097 kb on - strand, within Dsui_1903 at 2004.097 kb on - strand, within Dsui_1903 at 2004.097 kb on - strand, within Dsui_1903 at 2004.103 kb on - strand, within Dsui_1903 at 2004.207 kb on + strand, within Dsui_1903 at 2004.215 kb on - strand at 2004.217 kb on + strand at 2004.217 kb on + strand, within Dsui_1903 at 2004.217 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.238 kb on + strand, within Dsui_1903 at 2004.244 kb on + strand, within Dsui_1903 at 2004.246 kb on - strand at 2004.246 kb on - strand at 2004.246 kb on - strand at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand at 2004.246 kb on - strand, within Dsui_1903 at 2004.246 kb on - strand, within Dsui_1903 at 2004.299 kb on + strand, within Dsui_1903 at 2004.331 kb on - strand, within Dsui_1903 at 2004.376 kb on - strand, within Dsui_1903 at 2004.391 kb on - strand, within Dsui_1903 at 2004.477 kb on + strand, within Dsui_1903 at 2004.485 kb on - strand, within Dsui_1903 at 2004.539 kb on + strand, within Dsui_1903 at 2004.562 kb on - strand at 2004.634 kb on + strand at 2004.661 kb on - strand at 2004.663 kb on + strand at 2004.675 kb on + strand at 2004.683 kb on + strand at 2004.685 kb on - strand at 2004.691 kb on - strand at 2004.691 kb on - strand at 2004.691 kb on - strand at 2004.718 kb on - strand at 2004.757 kb on + strand at 2004.800 kb on + strand at 2004.844 kb on - strand at 2004.855 kb on + strand at 2004.903 kb on + strand at 2004.909 kb on + strand at 2004.909 kb on + strand at 2004.917 kb on - strand at 2004.927 kb on - strand at 2005.011 kb on + strand at 2005.050 kb on - strand at 2005.164 kb on + strand at 2005.173 kb on + strand at 2005.611 kb on - strand, within Dsui_1904
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 2,002,251 - Dsui_1902 0.81 -0.2 2,002,258 - Dsui_1902 0.82 -0.2 2,002,329 + Dsui_1902 0.86 -0.1 2,002,329 + Dsui_1902 0.86 -0.2 2,002,526 + +0.2 2,002,526 + +0.0 2,002,526 + +0.5 2,002,526 + -0.6 2,002,531 + -0.8 2,002,531 + +0.8 2,002,582 - +0.8 2,002,650 - +0.8 2,002,650 - -0.8 2,002,679 - +0.8 2,002,776 - -0.2 2,002,776 - -0.2 2,002,891 + +0.8 2,002,898 - -2.0 2,002,919 + +0.8 2,002,919 + +0.8 2,002,997 + -0.2 2,002,997 + -0.2 2,002,997 + +0.8 2,002,997 + -0.2 2,003,005 - +0.8 2,003,005 - -0.8 2,003,005 - -0.2 2,003,005 - -0.2 2,003,005 - -1.5 2,003,005 - +0.8 2,003,005 - -2.0 2,003,005 - -0.2 2,003,052 + -1.2 2,003,067 + +0.2 2,003,098 + -0.8 2,003,099 + +0.8 2,003,099 + -0.2 2,003,099 + -0.2 2,003,099 + -1.5 2,003,099 + +0.8 2,003,099 + -0.2 2,003,099 + -0.2 2,003,107 - -0.8 2,003,155 + +0.8 2,003,193 + -0.2 2,003,193 + -0.2 2,003,193 + +0.8 2,003,193 + -0.8 2,003,193 + -0.8 2,003,193 + -0.2 2,003,193 + +0.8 2,003,193 + -0.2 2,003,201 - -0.8 2,003,201 - +0.8 2,003,201 - +0.8 2,003,201 - -1.5 2,003,220 - +0.8 2,003,221 + -0.8 2,003,229 - -0.2 2,003,230 - +0.8 2,003,234 + +0.8 2,003,269 - +0.8 2,003,306 + +0.8 2,003,324 + +0.8 2,003,332 - -1.5 2,003,387 + Dsui_1903 0.12 -0.8 2,003,395 + Dsui_1903 0.12 +0.8 2,003,395 + Dsui_1903 0.12 -1.5 2,003,403 - +0.8 2,003,403 - -0.8 2,003,414 + Dsui_1903 0.14 -0.8 2,003,414 + Dsui_1903 0.14 -0.2 2,003,416 + +0.8 2,003,424 - Dsui_1903 0.14 -1.2 2,003,451 + Dsui_1903 0.16 -0.2 2,003,456 + +0.8 2,003,507 + Dsui_1903 0.20 +0.8 2,003,522 + Dsui_1903 0.21 -0.8 2,003,534 + Dsui_1903 0.21 +0.8 2,003,536 + +0.8 2,003,542 - Dsui_1903 0.22 +0.2 2,003,553 + Dsui_1903 0.23 +0.8 2,003,583 + Dsui_1903 0.25 -0.2 2,003,588 + Dsui_1903 0.25 -0.2 2,003,600 + Dsui_1903 0.26 -0.8 2,003,602 + Dsui_1903 0.26 -0.2 2,003,602 + Dsui_1903 0.26 -0.8 2,003,603 - Dsui_1903 0.26 +0.8 2,003,612 + Dsui_1903 0.26 -0.2 2,003,620 + Dsui_1903 0.27 +0.8 2,003,620 - Dsui_1903 0.27 -1.8 2,003,668 - Dsui_1903 0.30 +0.8 2,003,673 + Dsui_1903 0.30 -0.2 2,003,693 + Dsui_1903 0.32 +0.8 2,003,748 - Dsui_1903 0.35 -0.8 2,003,763 + +0.8 2,003,763 + Dsui_1903 0.36 +0.8 2,003,763 + Dsui_1903 0.36 -0.8 2,003,768 + Dsui_1903 0.36 -1.5 2,003,771 - Dsui_1903 0.37 -0.2 2,003,773 + Dsui_1903 0.37 +0.8 2,003,777 + Dsui_1903 0.37 +0.2 2,003,797 + Dsui_1903 0.38 +0.8 2,003,826 - Dsui_1903 0.40 +0.8 2,003,940 + Dsui_1903 0.48 +0.8 2,003,968 + Dsui_1903 0.49 -0.2 2,003,973 + Dsui_1903 0.50 -1.5 2,003,973 + Dsui_1903 0.50 -0.2 2,003,976 - Dsui_1903 0.50 +0.8 2,003,981 - Dsui_1903 0.50 +0.8 2,004,086 - Dsui_1903 0.57 -0.2 2,004,097 - Dsui_1903 0.58 -0.8 2,004,097 - Dsui_1903 0.58 -0.2 2,004,097 - Dsui_1903 0.58 +0.8 2,004,103 - Dsui_1903 0.58 +0.8 2,004,207 + Dsui_1903 0.65 -0.2 2,004,215 - -0.8 2,004,217 + -0.2 2,004,217 + Dsui_1903 0.65 -0.8 2,004,217 + Dsui_1903 0.65 -1.5 2,004,238 + Dsui_1903 0.67 -1.8 2,004,238 + Dsui_1903 0.67 +0.8 2,004,238 + Dsui_1903 0.67 -0.2 2,004,238 + Dsui_1903 0.67 +0.8 2,004,238 + Dsui_1903 0.67 -0.2 2,004,238 + Dsui_1903 0.67 -0.8 2,004,238 + Dsui_1903 0.67 +0.8 2,004,238 + Dsui_1903 0.67 -0.2 2,004,238 + Dsui_1903 0.67 -0.8 2,004,238 + Dsui_1903 0.67 +0.8 2,004,238 + Dsui_1903 0.67 +0.8 2,004,238 + Dsui_1903 0.67 +0.8 2,004,238 + Dsui_1903 0.67 -2.0 2,004,244 + Dsui_1903 0.67 -0.8 2,004,246 - +0.8 2,004,246 - +0.8 2,004,246 - +0.8 2,004,246 - Dsui_1903 0.67 -1.5 2,004,246 - Dsui_1903 0.67 -0.2 2,004,246 - Dsui_1903 0.67 +0.8 2,004,246 - Dsui_1903 0.67 +0.8 2,004,246 - Dsui_1903 0.67 -1.5 2,004,246 - Dsui_1903 0.67 -2.0 2,004,246 - Dsui_1903 0.67 -0.2 2,004,246 - +0.8 2,004,246 - Dsui_1903 0.67 -1.5 2,004,246 - +0.8 2,004,246 - Dsui_1903 0.67 +0.8 2,004,246 - Dsui_1903 0.67 -0.2 2,004,299 + Dsui_1903 0.71 +0.8 2,004,331 - Dsui_1903 0.73 -1.5 2,004,376 - Dsui_1903 0.76 +0.8 2,004,391 - Dsui_1903 0.77 -1.5 2,004,477 + Dsui_1903 0.82 +0.8 2,004,485 - Dsui_1903 0.83 +0.8 2,004,539 + Dsui_1903 0.86 -0.2 2,004,562 - -0.2 2,004,634 + +0.8 2,004,661 - -1.8 2,004,663 + -0.2 2,004,675 + +0.8 2,004,683 + -1.2 2,004,685 - -0.8 2,004,691 - +0.4 2,004,691 - -0.6 2,004,691 - -0.2 2,004,718 - +0.8 2,004,757 + +0.8 2,004,800 + +0.8 2,004,844 - +0.8 2,004,855 + +1.8 2,004,903 + -1.2 2,004,909 + -1.5 2,004,909 + +0.8 2,004,917 - -0.2 2,004,927 - -0.2 2,005,011 + -0.1 2,005,050 - +0.9 2,005,164 + -0.1 2,005,173 + -1.1 2,005,611 - Dsui_1904 0.21 -0.1
Or see this region's nucleotide sequence