Strain Fitness in Dechlorosoma suillum PS around Dsui_1819
Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Zinc 1 mM |
---|---|---|---|---|---|
remove | |||||
1,916,636 | + | -2.1 | |||
1,916,732 | - | Dsui_1818 | 0.16 | +0.5 | |
1,916,800 | + | Dsui_1818 | 0.23 | -1.0 | |
1,916,914 | + | Dsui_1818 | 0.34 | -1.1 | |
1,917,059 | + | Dsui_1818 | 0.49 | -1.3 | |
1,917,059 | + | Dsui_1818 | 0.49 | -2.7 | |
1,917,067 | - | Dsui_1818 | 0.50 | -1.1 | |
1,917,094 | + | Dsui_1818 | 0.53 | -2.0 | |
1,917,152 | - | +0.5 | |||
1,917,152 | - | Dsui_1818 | 0.59 | -0.5 | |
1,917,191 | + | Dsui_1818 | 0.63 | -0.2 | |
1,917,199 | - | -0.5 | |||
1,917,386 | + | Dsui_1818 | 0.82 | -2.7 | |
1,917,398 | + | Dsui_1818 | 0.84 | -0.1 | |
1,917,418 | + | Dsui_1818 | 0.86 | +0.4 | |
1,917,418 | + | -1.1 | |||
1,917,510 | + | -0.5 | |||
1,917,518 | - | +0.5 | |||
1,917,518 | - | +0.5 | |||
1,917,536 | + | -2.1 | |||
1,917,561 | - | -1.8 | |||
1,917,617 | - | -2.3 | |||
1,917,644 | + | -1.5 | |||
1,917,722 | - | Dsui_1819 | 0.46 | -1.5 | |
1,917,807 | + | Dsui_1819 | 0.88 | -2.8 | |
1,917,843 | + | -1.5 | |||
1,917,846 | - | -0.5 | |||
1,918,010 | + | -2.5 | |||
1,918,055 | - | -1.1 | |||
1,918,236 | + | Dsui_1820 | 0.12 | -0.1 | |
1,918,245 | + | +0.5 | |||
1,918,345 | + | Dsui_1820 | 0.22 | -1.8 | |
1,918,435 | + | +0.5 | |||
1,918,435 | + | Dsui_1820 | 0.30 | +0.5 | |
1,918,593 | - | +0.5 | |||
1,918,738 | + | +0.5 | |||
1,918,746 | - | +0.5 | |||
1,918,782 | - | +0.5 | |||
1,918,795 | - | Dsui_1820 | 0.61 | -0.0 |
Or see this region's nucleotide sequence