Strain Fitness in Dechlorosoma suillum PS around Dsui_1551
Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Zinc 1 mM |
---|---|---|---|---|---|
remove | |||||
1,612,456 | - | Dsui_1550 | 0.55 | -0.6 | |
1,612,457 | - | Dsui_1550 | 0.55 | +0.4 | |
1,612,550 | - | Dsui_1550 | 0.60 | -0.8 | |
1,612,569 | - | Dsui_1550 | 0.61 | +0.4 | |
1,612,574 | - | Dsui_1550 | 0.62 | -0.8 | |
1,612,817 | - | Dsui_1550 | 0.76 | -1.2 | |
1,613,057 | + | -0.6 | |||
1,613,197 | + | -1.6 | |||
1,613,210 | - | -0.4 | |||
1,613,235 | - | +0.3 | |||
1,613,293 | - | -1.9 | |||
1,613,465 | + | -0.4 | |||
1,613,632 | + | Dsui_1551 | 0.13 | -0.1 | |
1,613,972 | - | +0.4 | |||
1,614,004 | + | Dsui_1551 | 0.33 | -1.4 | |
1,614,101 | + | Dsui_1551 | 0.38 | -0.3 | |
1,614,341 | + | Dsui_1551 | 0.51 | -0.9 | |
1,614,353 | + | Dsui_1551 | 0.52 | -1.1 | |
1,614,361 | - | Dsui_1551 | 0.52 | -1.6 | |
1,614,405 | - | -1.2 | |||
1,614,517 | + | Dsui_1551 | 0.61 | -0.4 | |
1,614,743 | + | Dsui_1551 | 0.73 | -0.1 | |
1,614,797 | - | Dsui_1551 | 0.76 | +0.4 | |
1,614,968 | - | Dsui_1551 | 0.85 | +0.4 | |
1,614,978 | + | Dsui_1551 | 0.86 | -0.6 | |
1,614,987 | - | Dsui_1551 | 0.86 | -1.2 | |
1,615,019 | + | Dsui_1551 | 0.88 | -0.8 | |
1,615,059 | + | -0.2 | |||
1,615,202 | + | -0.5 | |||
1,615,262 | + | -0.3 | |||
1,615,601 | + | Dsui_1552 | 0.30 | +0.4 |
Or see this region's nucleotide sequence