Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1153 and Dsui_1154 are separated by 139 nucleotides Dsui_1154 and Dsui_1155 are separated by 6 nucleotides
Dsui_1153: Dsui_1153 - Ni,Fe-hydrogenase I small subunit, at 1,208,003 to 1,208,998
_1153
Dsui_1154: Dsui_1154 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,209,138 to 1,210,613
_1154
Dsui_1155: Dsui_1155 - methionyl-tRNA formyltransferase, at 1,210,620 to 1,212,353
_1155
Position (kb)
1209
1210
1211 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1208.165 kb on - strand, within Dsui_1153 at 1208.216 kb on + strand, within Dsui_1153 at 1208.269 kb on - strand, within Dsui_1153 at 1208.335 kb on + strand, within Dsui_1153 at 1208.415 kb on - strand, within Dsui_1153 at 1208.562 kb on + strand, within Dsui_1153 at 1208.719 kb on - strand, within Dsui_1153 at 1209.019 kb on + strand at 1209.038 kb on - strand at 1209.066 kb on + strand at 1209.187 kb on - strand at 1209.195 kb on + strand at 1209.211 kb on + strand at 1209.219 kb on - strand at 1209.284 kb on + strand at 1209.303 kb on - strand, within Dsui_1154 at 1209.357 kb on - strand, within Dsui_1154 at 1209.394 kb on + strand, within Dsui_1154 at 1209.427 kb on - strand, within Dsui_1154 at 1209.505 kb on + strand, within Dsui_1154 at 1209.505 kb on + strand, within Dsui_1154 at 1209.596 kb on + strand, within Dsui_1154 at 1209.596 kb on + strand, within Dsui_1154 at 1209.604 kb on - strand, within Dsui_1154 at 1209.717 kb on + strand at 1209.724 kb on + strand, within Dsui_1154 at 1209.814 kb on + strand, within Dsui_1154 at 1210.009 kb on + strand, within Dsui_1154 at 1210.009 kb on + strand, within Dsui_1154 at 1210.009 kb on + strand at 1210.037 kb on - strand, within Dsui_1154 at 1210.044 kb on + strand, within Dsui_1154 at 1210.186 kb on - strand, within Dsui_1154 at 1210.283 kb on + strand, within Dsui_1154 at 1210.366 kb on - strand, within Dsui_1154 at 1210.368 kb on + strand, within Dsui_1154 at 1210.411 kb on + strand, within Dsui_1154 at 1210.639 kb on + strand at 1210.639 kb on + strand at 1210.647 kb on - strand at 1210.647 kb on - strand at 1210.678 kb on + strand at 1210.709 kb on + strand at 1210.928 kb on - strand, within Dsui_1155 at 1210.941 kb on + strand, within Dsui_1155 at 1210.966 kb on + strand at 1211.266 kb on + strand, within Dsui_1155 at 1211.276 kb on + strand at 1211.283 kb on - strand, within Dsui_1155 at 1211.342 kb on + strand, within Dsui_1155 at 1211.401 kb on - strand, within Dsui_1155 at 1211.530 kb on + strand, within Dsui_1155 at 1211.552 kb on + strand, within Dsui_1155
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 1,208,165 - Dsui_1153 0.16 +0.0 1,208,216 + Dsui_1153 0.21 -0.7 1,208,269 - Dsui_1153 0.27 -0.9 1,208,335 + Dsui_1153 0.33 -0.7 1,208,415 - Dsui_1153 0.41 -2.0 1,208,562 + Dsui_1153 0.56 -0.7 1,208,719 - Dsui_1153 0.72 -0.4 1,209,019 + +0.3 1,209,038 - -1.4 1,209,066 + +0.3 1,209,187 - -0.0 1,209,195 + +0.3 1,209,211 + +0.3 1,209,219 - +0.3 1,209,284 + +0.3 1,209,303 - Dsui_1154 0.11 -0.4 1,209,357 - Dsui_1154 0.15 -2.5 1,209,394 + Dsui_1154 0.17 -1.3 1,209,427 - Dsui_1154 0.20 -1.0 1,209,505 + Dsui_1154 0.25 +0.3 1,209,505 + Dsui_1154 0.25 -1.7 1,209,596 + Dsui_1154 0.31 +0.3 1,209,596 + Dsui_1154 0.31 -1.3 1,209,604 - Dsui_1154 0.32 -0.5 1,209,717 + -0.7 1,209,724 + Dsui_1154 0.40 -1.7 1,209,814 + Dsui_1154 0.46 +0.3 1,210,009 + Dsui_1154 0.59 -0.7 1,210,009 + Dsui_1154 0.59 -0.7 1,210,009 + +0.3 1,210,037 - Dsui_1154 0.61 -0.7 1,210,044 + Dsui_1154 0.61 -2.5 1,210,186 - Dsui_1154 0.71 +0.3 1,210,283 + Dsui_1154 0.78 -0.7 1,210,366 - Dsui_1154 0.83 -0.3 1,210,368 + Dsui_1154 0.83 -1.7 1,210,411 + Dsui_1154 0.86 -2.9 1,210,639 + -2.0 1,210,639 + -1.3 1,210,647 - -1.1 1,210,647 - -0.7 1,210,678 + -2.0 1,210,709 + -2.0 1,210,928 - Dsui_1155 0.18 -0.4 1,210,941 + Dsui_1155 0.19 +0.3 1,210,966 + -0.7 1,211,266 + Dsui_1155 0.37 +0.3 1,211,276 + +0.3 1,211,283 - Dsui_1155 0.38 -0.6 1,211,342 + Dsui_1155 0.42 -2.5 1,211,401 - Dsui_1155 0.45 -0.5 1,211,530 + Dsui_1155 0.52 +0.3 1,211,552 + Dsui_1155 0.54 -1.3
Or see this region's nucleotide sequence