Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1074 and Dsui_1075 are separated by 19 nucleotides Dsui_1075 and Dsui_1076 are separated by 66 nucleotides
Dsui_1074: Dsui_1074 - heavy metal efflux pump, cobalt-zinc-cadmium, at 1,107,711 to 1,110,845
_1074
Dsui_1075: Dsui_1075 - hypothetical protein, at 1,110,865 to 1,111,266
_1075
Dsui_1076: Dsui_1076 - copper/silver-translocating P-type ATPase, at 1,111,333 to 1,113,615
_1076
Position (kb)
1110
1111
1112 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1109.866 kb on + strand, within Dsui_1074 at 1109.890 kb on + strand, within Dsui_1074 at 1109.934 kb on + strand, within Dsui_1074 at 1109.942 kb on - strand, within Dsui_1074 at 1109.942 kb on - strand, within Dsui_1074 at 1109.949 kb on + strand, within Dsui_1074 at 1110.009 kb on - strand, within Dsui_1074 at 1110.098 kb on + strand, within Dsui_1074 at 1110.106 kb on - strand, within Dsui_1074 at 1110.115 kb on - strand, within Dsui_1074 at 1110.154 kb on - strand, within Dsui_1074 at 1110.182 kb on + strand, within Dsui_1074 at 1110.258 kb on + strand, within Dsui_1074 at 1110.302 kb on + strand, within Dsui_1074 at 1110.302 kb on + strand, within Dsui_1074 at 1110.310 kb on - strand, within Dsui_1074 at 1110.315 kb on - strand, within Dsui_1074 at 1110.317 kb on + strand, within Dsui_1074 at 1110.319 kb on + strand, within Dsui_1074 at 1110.413 kb on + strand, within Dsui_1074 at 1110.413 kb on + strand, within Dsui_1074 at 1110.421 kb on - strand, within Dsui_1074 at 1110.421 kb on - strand, within Dsui_1074 at 1110.421 kb on - strand, within Dsui_1074 at 1110.422 kb on + strand, within Dsui_1074 at 1110.429 kb on - strand, within Dsui_1074 at 1110.430 kb on - strand, within Dsui_1074 at 1110.483 kb on - strand, within Dsui_1074 at 1110.524 kb on + strand, within Dsui_1074 at 1110.537 kb on - strand at 1110.549 kb on - strand at 1110.557 kb on - strand at 1110.559 kb on - strand at 1110.563 kb on + strand at 1110.591 kb on - strand at 1110.717 kb on - strand at 1110.769 kb on + strand at 1110.963 kb on - strand, within Dsui_1075 at 1110.970 kb on - strand, within Dsui_1075 at 1110.973 kb on + strand, within Dsui_1075 at 1111.024 kb on - strand, within Dsui_1075 at 1111.062 kb on + strand, within Dsui_1075 at 1111.070 kb on - strand, within Dsui_1075 at 1111.070 kb on - strand, within Dsui_1075 at 1111.106 kb on + strand, within Dsui_1075 at 1111.148 kb on - strand, within Dsui_1075 at 1111.239 kb on + strand at 1111.263 kb on - strand at 1111.287 kb on + strand at 1111.296 kb on + strand at 1111.296 kb on + strand at 1111.296 kb on + strand at 1111.304 kb on - strand at 1111.322 kb on - strand at 1111.333 kb on - strand at 1111.379 kb on + strand at 1111.507 kb on + strand at 1111.507 kb on + strand at 1111.507 kb on + strand at 1111.515 kb on - strand at 1111.515 kb on - strand at 1111.542 kb on + strand at 1111.599 kb on + strand, within Dsui_1076 at 1111.666 kb on - strand, within Dsui_1076 at 1111.682 kb on - strand, within Dsui_1076 at 1111.729 kb on + strand, within Dsui_1076 at 1111.749 kb on + strand, within Dsui_1076 at 1111.807 kb on - strand, within Dsui_1076 at 1111.817 kb on - strand, within Dsui_1076 at 1111.891 kb on + strand, within Dsui_1076 at 1111.894 kb on - strand, within Dsui_1076 at 1111.935 kb on - strand, within Dsui_1076 at 1111.945 kb on - strand, within Dsui_1076 at 1111.958 kb on + strand, within Dsui_1076 at 1112.025 kb on - strand, within Dsui_1076 at 1112.032 kb on - strand, within Dsui_1076 at 1112.042 kb on - strand, within Dsui_1076 at 1112.042 kb on - strand, within Dsui_1076 at 1112.095 kb on + strand, within Dsui_1076 at 1112.127 kb on + strand, within Dsui_1076 at 1112.129 kb on + strand, within Dsui_1076 at 1112.143 kb on - strand, within Dsui_1076 at 1112.171 kb on + strand, within Dsui_1076 at 1112.179 kb on - strand, within Dsui_1076 at 1112.255 kb on - strand, within Dsui_1076
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 1,109,866 + Dsui_1074 0.69 +0.5 1,109,890 + Dsui_1074 0.70 -0.5 1,109,934 + Dsui_1074 0.71 +0.5 1,109,942 - Dsui_1074 0.71 +0.5 1,109,942 - Dsui_1074 0.71 +0.5 1,109,949 + Dsui_1074 0.71 -0.7 1,110,009 - Dsui_1074 0.73 -1.5 1,110,098 + Dsui_1074 0.76 +0.5 1,110,106 - Dsui_1074 0.76 -1.5 1,110,115 - Dsui_1074 0.77 +0.5 1,110,154 - Dsui_1074 0.78 -1.1 1,110,182 + Dsui_1074 0.79 -2.5 1,110,258 + Dsui_1074 0.81 +0.5 1,110,302 + Dsui_1074 0.83 -1.8 1,110,302 + Dsui_1074 0.83 +0.5 1,110,310 - Dsui_1074 0.83 +0.5 1,110,315 - Dsui_1074 0.83 -1.5 1,110,317 + Dsui_1074 0.83 +0.5 1,110,319 + Dsui_1074 0.83 -0.1 1,110,413 + Dsui_1074 0.86 +0.5 1,110,413 + Dsui_1074 0.86 +1.5 1,110,421 - Dsui_1074 0.86 +0.5 1,110,421 - Dsui_1074 0.86 +0.5 1,110,421 - Dsui_1074 0.86 -1.8 1,110,422 + Dsui_1074 0.86 -1.1 1,110,429 - Dsui_1074 0.87 -0.5 1,110,430 - Dsui_1074 0.87 +0.5 1,110,483 - Dsui_1074 0.88 -1.5 1,110,524 + Dsui_1074 0.90 +2.5 1,110,537 - -0.5 1,110,549 - +0.5 1,110,557 - -0.5 1,110,559 - -3.3 1,110,563 + +1.5 1,110,591 - -2.3 1,110,717 - -0.5 1,110,769 + -1.3 1,110,963 - Dsui_1075 0.24 +0.5 1,110,970 - Dsui_1075 0.26 -0.5 1,110,973 + Dsui_1075 0.27 -1.8 1,111,024 - Dsui_1075 0.40 +0.5 1,111,062 + Dsui_1075 0.49 -1.8 1,111,070 - Dsui_1075 0.51 -1.1 1,111,070 - Dsui_1075 0.51 -0.5 1,111,106 + Dsui_1075 0.60 -2.1 1,111,148 - Dsui_1075 0.70 -0.5 1,111,239 + +0.5 1,111,263 - -1.1 1,111,287 + -1.8 1,111,296 + -1.8 1,111,296 + -0.5 1,111,296 + -1.1 1,111,304 - -1.8 1,111,322 - +0.5 1,111,333 - +0.5 1,111,379 + +0.5 1,111,507 + -1.8 1,111,507 + +0.5 1,111,507 + +0.5 1,111,515 - -1.8 1,111,515 - -0.5 1,111,542 + -1.3 1,111,599 + Dsui_1076 0.12 -0.5 1,111,666 - Dsui_1076 0.15 -1.1 1,111,682 - Dsui_1076 0.15 +0.5 1,111,729 + Dsui_1076 0.17 -0.9 1,111,749 + Dsui_1076 0.18 -0.5 1,111,807 - Dsui_1076 0.21 -0.5 1,111,817 - Dsui_1076 0.21 +0.5 1,111,891 + Dsui_1076 0.24 +0.5 1,111,894 - Dsui_1076 0.25 -0.5 1,111,935 - Dsui_1076 0.26 +0.5 1,111,945 - Dsui_1076 0.27 -1.1 1,111,958 + Dsui_1076 0.27 -1.6 1,112,025 - Dsui_1076 0.30 +0.5 1,112,032 - Dsui_1076 0.31 -1.5 1,112,042 - Dsui_1076 0.31 -0.5 1,112,042 - Dsui_1076 0.31 +0.5 1,112,095 + Dsui_1076 0.33 +0.5 1,112,127 + Dsui_1076 0.35 -0.5 1,112,129 + Dsui_1076 0.35 +0.5 1,112,143 - Dsui_1076 0.35 +0.5 1,112,171 + Dsui_1076 0.37 -1.1 1,112,179 - Dsui_1076 0.37 +0.5 1,112,255 - Dsui_1076 0.40 +0.5
Or see this region's nucleotide sequence