Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0831 and Dsui_0833 are separated by 398 nucleotides Dsui_0833 and Dsui_0834 are separated by 41 nucleotides Dsui_0834 and Dsui_0835 overlap by 1 nucleotides Dsui_0835 and Dsui_0836 are separated by 55 nucleotides
Dsui_0831: Dsui_0831 - chromosomal replication initiator protein DnaA, at 846,680 to 848,101
_0831
Dsui_0833: Dsui_0833 - ribosomal protein L34, bacterial type, at 848,500 to 848,634
_0833
Dsui_0834: Dsui_0834 - ribonuclease P protein component, at 848,676 to 849,140
_0834
Dsui_0835: Dsui_0835 - conserved hypothetical protein YidD, at 849,140 to 849,370
_0835
Dsui_0836: Dsui_0836 - membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein, at 849,426 to 851,081
_0836
Position (kb) 848
849 Strain fitness (log2 ratio) -2
-1
0
1 at 848.183 kb on - strand at 848.236 kb on - strand at 848.253 kb on - strand at 848.253 kb on - strand at 848.258 kb on - strand at 848.262 kb on + strand at 848.262 kb on + strand at 848.262 kb on + strand at 848.265 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.388 kb on - strand at 848.427 kb on + strand at 848.430 kb on - strand at 848.435 kb on - strand at 848.435 kb on - strand at 848.638 kb on + strand at 849.058 kb on - strand at 849.109 kb on + strand at 849.148 kb on + strand at 849.156 kb on - strand at 849.157 kb on + strand at 849.163 kb on - strand at 849.170 kb on - strand at 849.210 kb on + strand, within Dsui_0835 at 849.215 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.257 kb on - strand, within Dsui_0835 at 849.264 kb on - strand, within Dsui_0835 at 849.272 kb on + strand, within Dsui_0835 at 849.296 kb on + strand, within Dsui_0835
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 848,183 - -0.2 848,236 - -0.0 848,253 - +0.1 848,253 - +0.0 848,258 - +0.2 848,262 + +0.5 848,262 + -0.5 848,262 + +0.5 848,265 - -0.0 848,270 - +0.1 848,270 - +0.1 848,270 - +0.2 848,270 - -0.1 848,270 - +0.2 848,270 - +0.0 848,270 - +0.2 848,388 - +0.5 848,427 + -2.1 848,430 - -0.5 848,435 - -0.5 848,435 - +0.5 848,638 + -1.3 849,058 - +0.5 849,109 + +0.4 849,148 + +0.7 849,156 - +0.5 849,157 + +0.1 849,163 - +0.5 849,170 - +0.5 849,210 + Dsui_0835 0.30 -0.4 849,215 + Dsui_0835 0.32 -0.4 849,249 + Dsui_0835 0.47 -0.6 849,249 + Dsui_0835 0.47 -0.6 849,249 + Dsui_0835 0.47 -0.4 849,249 + Dsui_0835 0.47 -0.2 849,257 - Dsui_0835 0.51 +0.5 849,264 - Dsui_0835 0.54 +0.5 849,272 + Dsui_0835 0.57 -0.8 849,296 + Dsui_0835 0.68 -1.2
Or see this region's nucleotide sequence