Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0819 and Dsui_0820 are separated by 10 nucleotides Dsui_0820 and Dsui_0821 are separated by 189 nucleotides
Dsui_0819: Dsui_0819 - DNA protecting protein DprA, at 830,349 to 831,467
_0819
Dsui_0820: Dsui_0820 - hypothetical protein, at 831,478 to 831,966
_0820
Dsui_0821: Dsui_0821 - DNA topoisomerase III, at 832,156 to 834,741
_0821
Position (kb) 831
832 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 830.500 kb on + strand, within Dsui_0819 at 830.543 kb on - strand, within Dsui_0819 at 830.546 kb on + strand, within Dsui_0819 at 830.547 kb on + strand, within Dsui_0819 at 830.555 kb on - strand, within Dsui_0819 at 830.555 kb on - strand, within Dsui_0819 at 830.555 kb on - strand, within Dsui_0819 at 830.581 kb on + strand, within Dsui_0819 at 830.595 kb on + strand, within Dsui_0819 at 830.603 kb on - strand, within Dsui_0819 at 830.605 kb on + strand, within Dsui_0819 at 830.634 kb on - strand, within Dsui_0819 at 830.645 kb on + strand, within Dsui_0819 at 830.653 kb on - strand, within Dsui_0819 at 830.658 kb on - strand, within Dsui_0819 at 830.662 kb on + strand, within Dsui_0819 at 830.662 kb on + strand, within Dsui_0819 at 830.685 kb on + strand, within Dsui_0819 at 830.688 kb on - strand, within Dsui_0819 at 830.688 kb on - strand, within Dsui_0819 at 830.693 kb on - strand, within Dsui_0819 at 830.693 kb on - strand, within Dsui_0819 at 830.693 kb on - strand, within Dsui_0819 at 830.693 kb on - strand, within Dsui_0819 at 830.718 kb on + strand, within Dsui_0819 at 830.726 kb on - strand, within Dsui_0819 at 830.733 kb on - strand, within Dsui_0819 at 830.733 kb on - strand, within Dsui_0819 at 830.771 kb on - strand, within Dsui_0819 at 830.801 kb on - strand, within Dsui_0819 at 830.817 kb on - strand, within Dsui_0819 at 830.858 kb on + strand, within Dsui_0819 at 830.879 kb on + strand, within Dsui_0819 at 830.879 kb on + strand, within Dsui_0819 at 830.887 kb on - strand, within Dsui_0819 at 830.929 kb on + strand, within Dsui_0819 at 830.962 kb on - strand, within Dsui_0819 at 831.017 kb on + strand, within Dsui_0819 at 831.019 kb on - strand, within Dsui_0819 at 831.020 kb on - strand, within Dsui_0819 at 831.020 kb on - strand, within Dsui_0819 at 831.025 kb on - strand, within Dsui_0819 at 831.029 kb on + strand, within Dsui_0819 at 831.088 kb on + strand, within Dsui_0819 at 831.112 kb on + strand, within Dsui_0819 at 831.171 kb on - strand, within Dsui_0819 at 831.183 kb on + strand, within Dsui_0819 at 831.330 kb on - strand, within Dsui_0819 at 831.330 kb on - strand, within Dsui_0819 at 831.330 kb on - strand, within Dsui_0819 at 831.332 kb on + strand, within Dsui_0819 at 831.363 kb on + strand at 831.363 kb on + strand at 831.371 kb on - strand at 831.416 kb on + strand at 831.427 kb on + strand at 831.471 kb on - strand at 831.471 kb on - strand at 831.471 kb on - strand at 831.535 kb on - strand, within Dsui_0820 at 831.587 kb on + strand, within Dsui_0820 at 831.619 kb on + strand, within Dsui_0820 at 831.645 kb on + strand, within Dsui_0820 at 831.652 kb on - strand, within Dsui_0820 at 831.653 kb on + strand, within Dsui_0820 at 831.716 kb on - strand, within Dsui_0820 at 831.767 kb on + strand, within Dsui_0820 at 831.775 kb on - strand, within Dsui_0820 at 831.777 kb on + strand, within Dsui_0820 at 831.785 kb on - strand, within Dsui_0820 at 831.797 kb on + strand, within Dsui_0820 at 831.819 kb on - strand, within Dsui_0820 at 831.822 kb on + strand, within Dsui_0820 at 831.860 kb on + strand, within Dsui_0820 at 831.861 kb on + strand, within Dsui_0820 at 831.914 kb on + strand, within Dsui_0820 at 832.013 kb on + strand at 832.049 kb on + strand at 832.055 kb on + strand at 832.064 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 830,500 + Dsui_0819 0.13 -0.1 830,543 - Dsui_0819 0.17 -2.1 830,546 + Dsui_0819 0.18 -0.1 830,547 + Dsui_0819 0.18 -0.0 830,555 - Dsui_0819 0.18 -2.3 830,555 - Dsui_0819 0.18 -0.9 830,555 - Dsui_0819 0.18 -1.9 830,581 + Dsui_0819 0.21 +0.5 830,595 + Dsui_0819 0.22 -0.0 830,603 - Dsui_0819 0.23 -0.9 830,605 + Dsui_0819 0.23 -0.1 830,634 - Dsui_0819 0.25 -1.1 830,645 + Dsui_0819 0.26 -0.3 830,653 - Dsui_0819 0.27 +0.5 830,658 - Dsui_0819 0.28 -0.5 830,662 + Dsui_0819 0.28 -0.4 830,662 + Dsui_0819 0.28 +0.3 830,685 + Dsui_0819 0.30 -0.5 830,688 - Dsui_0819 0.30 -0.1 830,688 - Dsui_0819 0.30 +0.5 830,693 - Dsui_0819 0.31 -3.3 830,693 - Dsui_0819 0.31 +0.1 830,693 - Dsui_0819 0.31 -1.9 830,693 - Dsui_0819 0.31 -1.3 830,718 + Dsui_0819 0.33 -0.3 830,726 - Dsui_0819 0.34 -1.5 830,733 - Dsui_0819 0.34 -1.1 830,733 - Dsui_0819 0.34 -0.5 830,771 - Dsui_0819 0.38 -1.5 830,801 - Dsui_0819 0.40 -1.9 830,817 - Dsui_0819 0.42 -1.9 830,858 + Dsui_0819 0.45 -0.3 830,879 + Dsui_0819 0.47 -0.3 830,879 + Dsui_0819 0.47 -1.6 830,887 - Dsui_0819 0.48 -2.0 830,929 + Dsui_0819 0.52 -0.3 830,962 - Dsui_0819 0.55 -0.5 831,017 + Dsui_0819 0.60 +0.4 831,019 - Dsui_0819 0.60 -1.8 831,020 - Dsui_0819 0.60 -0.5 831,020 - Dsui_0819 0.60 -1.1 831,025 - Dsui_0819 0.60 -0.8 831,029 + Dsui_0819 0.61 -0.8 831,088 + Dsui_0819 0.66 -1.8 831,112 + Dsui_0819 0.68 -1.9 831,171 - Dsui_0819 0.73 -2.1 831,183 + Dsui_0819 0.75 +0.5 831,330 - Dsui_0819 0.88 +0.5 831,330 - Dsui_0819 0.88 -1.9 831,330 - Dsui_0819 0.88 -0.5 831,332 + Dsui_0819 0.88 +0.7 831,363 + -1.1 831,363 + -0.5 831,371 - -1.9 831,416 + +0.1 831,427 + +0.0 831,471 - -1.4 831,471 - -1.0 831,471 - +0.1 831,535 - Dsui_0820 0.12 -3.2 831,587 + Dsui_0820 0.22 -0.2 831,619 + Dsui_0820 0.29 +0.2 831,645 + Dsui_0820 0.34 +0.1 831,652 - Dsui_0820 0.36 -2.3 831,653 + Dsui_0820 0.36 +0.1 831,716 - Dsui_0820 0.49 -1.5 831,767 + Dsui_0820 0.59 -0.1 831,775 - Dsui_0820 0.61 -1.1 831,777 + Dsui_0820 0.61 +0.3 831,785 - Dsui_0820 0.63 -1.3 831,797 + Dsui_0820 0.65 +0.1 831,819 - Dsui_0820 0.70 -1.8 831,822 + Dsui_0820 0.70 +0.0 831,860 + Dsui_0820 0.78 +0.1 831,861 + Dsui_0820 0.78 -0.1 831,914 + Dsui_0820 0.89 +0.1 832,013 + +0.0 832,049 + -0.0 832,055 + -0.1 832,064 + -0.3
Or see this region's nucleotide sequence