Strain Fitness in Dechlorosoma suillum PS around Dsui_0782

Experiment: ALP with Zinc 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0781 and Dsui_0782 are separated by 106 nucleotidesDsui_0782 and Dsui_0783 are separated by 91 nucleotidesDsui_0783 and Dsui_0784 are separated by 1 nucleotides Dsui_0781: Dsui_0781 - putative ferric reductase, at 788,338 to 789,702 _0781 Dsui_0782: Dsui_0782 - N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form, at 789,809 to 790,768 _0782 Dsui_0783: Dsui_0783 - acetyltransferase, N-acetylglutamate synthase, at 790,860 to 791,336 _0783 Dsui_0784: Dsui_0784 - hypothetical protein, at 791,338 to 792,546 _0784 Position (kb) 789 790 791Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 788.842 kb on - strandat 788.882 kb on + strand, within Dsui_0781at 788.890 kb on - strand, within Dsui_0781at 788.896 kb on + strand, within Dsui_0781at 788.899 kb on + strand, within Dsui_0781at 788.909 kb on + strand, within Dsui_0781at 789.059 kb on + strandat 789.099 kb on + strand, within Dsui_0781at 789.159 kb on + strand, within Dsui_0781at 789.234 kb on + strand, within Dsui_0781at 789.302 kb on - strandat 789.304 kb on + strand, within Dsui_0781at 789.312 kb on - strand, within Dsui_0781at 789.312 kb on - strandat 789.425 kb on + strand, within Dsui_0781at 789.433 kb on - strand, within Dsui_0781at 789.435 kb on + strand, within Dsui_0781at 789.448 kb on + strand, within Dsui_0781at 789.463 kb on - strandat 789.651 kb on - strandat 789.657 kb on - strandat 789.657 kb on - strandat 789.657 kb on - strandat 789.657 kb on - strandat 789.704 kb on + strandat 789.706 kb on + strandat 789.753 kb on - strandat 790.792 kb on + strandat 790.830 kb on + strandat 790.835 kb on + strandat 790.835 kb on + strandat 790.843 kb on - strandat 790.843 kb on - strandat 790.843 kb on - strandat 790.843 kb on - strandat 790.848 kb on - strandat 790.848 kb on - strandat 790.849 kb on - strandat 790.878 kb on - strandat 790.890 kb on + strandat 790.897 kb on + strandat 790.903 kb on + strandat 790.917 kb on + strand, within Dsui_0783at 790.925 kb on - strand, within Dsui_0783at 790.925 kb on - strand, within Dsui_0783at 790.983 kb on + strand, within Dsui_0783at 790.992 kb on - strand, within Dsui_0783at 791.003 kb on - strand, within Dsui_0783at 791.017 kb on + strand, within Dsui_0783at 791.017 kb on + strand, within Dsui_0783at 791.025 kb on - strand, within Dsui_0783at 791.025 kb on - strand, within Dsui_0783at 791.025 kb on - strand, within Dsui_0783at 791.025 kb on - strand, within Dsui_0783at 791.062 kb on + strand, within Dsui_0783at 791.075 kb on - strand, within Dsui_0783at 791.090 kb on - strand, within Dsui_0783at 791.104 kb on - strand, within Dsui_0783at 791.106 kb on - strand, within Dsui_0783at 791.112 kb on - strand, within Dsui_0783at 791.134 kb on + strand, within Dsui_0783at 791.142 kb on - strand, within Dsui_0783at 791.149 kb on + strand, within Dsui_0783at 791.172 kb on - strand, within Dsui_0783at 791.176 kb on + strand, within Dsui_0783at 791.181 kb on + strand, within Dsui_0783at 791.214 kb on - strand, within Dsui_0783at 791.242 kb on + strand, within Dsui_0783at 791.242 kb on + strand, within Dsui_0783at 791.250 kb on - strand, within Dsui_0783at 791.262 kb on + strand, within Dsui_0783at 791.262 kb on + strand, within Dsui_0783at 791.262 kb on + strand, within Dsui_0783at 791.262 kb on + strand, within Dsui_0783at 791.262 kb on + strand, within Dsui_0783at 791.267 kb on + strand, within Dsui_0783at 791.267 kb on + strand, within Dsui_0783at 791.270 kb on - strand, within Dsui_0783at 791.275 kb on - strand, within Dsui_0783at 791.275 kb on - strand, within Dsui_0783at 791.275 kb on - strand, within Dsui_0783at 791.329 kb on + strandat 791.333 kb on - strandat 791.382 kb on + strandat 791.467 kb on - strand, within Dsui_0784at 791.623 kb on + strand, within Dsui_0784at 791.631 kb on + strand, within Dsui_0784at 791.641 kb on - strand, within Dsui_0784at 791.757 kb on + strand, within Dsui_0784

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM
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788,842 - -0.5
788,882 + Dsui_0781 0.40 -1.5
788,890 - Dsui_0781 0.40 -0.5
788,896 + Dsui_0781 0.41 +0.5
788,899 + Dsui_0781 0.41 +0.5
788,909 + Dsui_0781 0.42 -0.5
789,059 + +0.5
789,099 + Dsui_0781 0.56 +0.5
789,159 + Dsui_0781 0.60 -0.5
789,234 + Dsui_0781 0.66 +0.5
789,302 - +0.5
789,304 + Dsui_0781 0.71 -0.5
789,312 - Dsui_0781 0.71 -1.1
789,312 - +0.5
789,425 + Dsui_0781 0.80 +0.5
789,433 - Dsui_0781 0.80 -0.5
789,435 + Dsui_0781 0.80 +0.5
789,448 + Dsui_0781 0.81 +0.5
789,463 - +0.5
789,651 - +0.5
789,657 - -0.5
789,657 - -0.5
789,657 - -0.5
789,657 - -1.1
789,704 + -0.4
789,706 + -0.5
789,753 - +2.5
790,792 + -0.1
790,830 + +1.0
790,835 + -0.1
790,835 + +0.5
790,843 - -0.0
790,843 - +0.4
790,843 - +0.2
790,843 - -0.3
790,848 - -0.4
790,848 - -0.6
790,849 - -1.0
790,878 - +0.8
790,890 + -1.0
790,897 + -0.3
790,903 + +0.5
790,917 + Dsui_0783 0.12 -0.3
790,925 - Dsui_0783 0.14 -0.9
790,925 - Dsui_0783 0.14 -1.3
790,983 + Dsui_0783 0.26 -0.1
790,992 - Dsui_0783 0.28 -0.4
791,003 - Dsui_0783 0.30 -0.0
791,017 + Dsui_0783 0.33 -3.5
791,017 + Dsui_0783 0.33 -0.5
791,025 - Dsui_0783 0.35 -0.4
791,025 - Dsui_0783 0.35 -0.7
791,025 - Dsui_0783 0.35 +0.4
791,025 - Dsui_0783 0.35 -0.4
791,062 + Dsui_0783 0.42 +0.1
791,075 - Dsui_0783 0.45 -0.6
791,090 - Dsui_0783 0.48 +0.2
791,104 - Dsui_0783 0.51 -0.4
791,106 - Dsui_0783 0.52 -0.1
791,112 - Dsui_0783 0.53 -0.8
791,134 + Dsui_0783 0.57 -1.1
791,142 - Dsui_0783 0.59 -1.2
791,149 + Dsui_0783 0.61 +0.5
791,172 - Dsui_0783 0.65 -0.2
791,176 + Dsui_0783 0.66 -0.5
791,181 + Dsui_0783 0.67 -2.1
791,214 - Dsui_0783 0.74 -0.8
791,242 + Dsui_0783 0.80 -0.5
791,242 + Dsui_0783 0.80 -1.1
791,250 - Dsui_0783 0.82 -0.5
791,262 + Dsui_0783 0.84 +0.5
791,262 + Dsui_0783 0.84 -1.1
791,262 + Dsui_0783 0.84 -3.0
791,262 + Dsui_0783 0.84 -0.5
791,262 + Dsui_0783 0.84 -1.1
791,267 + Dsui_0783 0.85 -2.5
791,267 + Dsui_0783 0.85 -1.5
791,270 - Dsui_0783 0.86 -0.3
791,275 - Dsui_0783 0.87 -0.1
791,275 - Dsui_0783 0.87 -0.9
791,275 - Dsui_0783 0.87 +0.3
791,329 + -0.5
791,333 - -0.2
791,382 + -0.5
791,467 - Dsui_0784 0.11 -0.3
791,623 + Dsui_0784 0.24 +0.5
791,631 + Dsui_0784 0.24 +0.5
791,641 - Dsui_0784 0.25 -0.3
791,757 + Dsui_0784 0.35 -0.5

Or see this region's nucleotide sequence