Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0632 and Dsui_0633 are separated by 54 nucleotides Dsui_0633 and Dsui_0634 are separated by 105 nucleotides
Dsui_0632: Dsui_0632 - thioredoxin domain-containing protein, at 625,361 to 627,409
_0632
Dsui_0633: Dsui_0633 - transcriptional regulator, at 627,464 to 628,369
_0633
Dsui_0634: Dsui_0634 - putative permease, DMT superfamily, at 628,475 to 629,386
_0634
Position (kb) 627
628
629 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 626.554 kb on + strand, within Dsui_0632 at 626.568 kb on + strand, within Dsui_0632 at 626.643 kb on - strand, within Dsui_0632 at 626.837 kb on + strand, within Dsui_0632 at 626.857 kb on + strand, within Dsui_0632 at 626.879 kb on - strand, within Dsui_0632 at 626.889 kb on - strand, within Dsui_0632 at 626.934 kb on + strand, within Dsui_0632 at 626.934 kb on + strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.990 kb on + strand, within Dsui_0632 at 627.143 kb on - strand, within Dsui_0632 at 627.175 kb on + strand, within Dsui_0632 at 627.241 kb on - strand at 627.261 kb on - strand at 627.381 kb on - strand at 627.462 kb on + strand at 627.497 kb on - strand at 627.627 kb on - strand, within Dsui_0633 at 627.673 kb on - strand, within Dsui_0633 at 627.741 kb on - strand, within Dsui_0633 at 627.883 kb on - strand, within Dsui_0633 at 627.943 kb on - strand, within Dsui_0633 at 627.988 kb on + strand, within Dsui_0633 at 627.996 kb on - strand, within Dsui_0633 at 627.996 kb on - strand, within Dsui_0633 at 627.996 kb on - strand, within Dsui_0633 at 627.999 kb on + strand, within Dsui_0633 at 628.004 kb on + strand, within Dsui_0633 at 628.012 kb on - strand, within Dsui_0633 at 628.012 kb on - strand, within Dsui_0633 at 628.075 kb on - strand, within Dsui_0633 at 628.135 kb on + strand, within Dsui_0633 at 628.215 kb on + strand, within Dsui_0633 at 628.340 kb on - strand at 628.578 kb on - strand, within Dsui_0634 at 628.642 kb on + strand, within Dsui_0634 at 628.685 kb on - strand, within Dsui_0634 at 628.701 kb on + strand, within Dsui_0634 at 628.701 kb on + strand, within Dsui_0634 at 628.776 kb on - strand, within Dsui_0634 at 628.796 kb on + strand, within Dsui_0634 at 628.806 kb on + strand, within Dsui_0634 at 628.819 kb on - strand, within Dsui_0634 at 628.845 kb on - strand, within Dsui_0634 at 628.982 kb on + strand, within Dsui_0634 at 628.987 kb on + strand, within Dsui_0634 at 628.990 kb on - strand, within Dsui_0634 at 628.990 kb on - strand, within Dsui_0634 at 629.188 kb on - strand, within Dsui_0634 at 629.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 626,554 + Dsui_0632 0.58 -0.6 626,568 + Dsui_0632 0.59 -1.2 626,643 - Dsui_0632 0.63 +0.3 626,837 + Dsui_0632 0.72 -1.9 626,857 + Dsui_0632 0.73 -3.0 626,879 - Dsui_0632 0.74 -0.2 626,889 - Dsui_0632 0.75 -0.2 626,934 + Dsui_0632 0.77 +0.4 626,934 + Dsui_0632 0.77 -0.6 626,942 - Dsui_0632 0.77 -0.2 626,942 - Dsui_0632 0.77 +0.3 626,942 - Dsui_0632 0.77 +0.0 626,942 - Dsui_0632 0.77 -0.2 626,990 + Dsui_0632 0.80 -2.4 627,143 - Dsui_0632 0.87 -0.1 627,175 + Dsui_0632 0.89 +0.4 627,241 - -0.2 627,261 - -0.3 627,381 - +0.4 627,462 + -0.6 627,497 - -0.0 627,627 - Dsui_0633 0.18 +0.5 627,673 - Dsui_0633 0.23 +1.1 627,741 - Dsui_0633 0.31 -0.2 627,883 - Dsui_0633 0.46 -0.8 627,943 - Dsui_0633 0.53 +0.3 627,988 + Dsui_0633 0.58 -0.6 627,996 - Dsui_0633 0.59 -0.2 627,996 - Dsui_0633 0.59 +0.2 627,996 - Dsui_0633 0.59 -0.5 627,999 + Dsui_0633 0.59 +0.4 628,004 + Dsui_0633 0.60 +0.4 628,012 - Dsui_0633 0.60 -0.2 628,012 - Dsui_0633 0.60 -0.3 628,075 - Dsui_0633 0.67 -0.1 628,135 + Dsui_0633 0.74 -0.6 628,215 + Dsui_0633 0.83 -1.2 628,340 - -0.2 628,578 - Dsui_0634 0.11 +0.4 628,642 + Dsui_0634 0.18 -0.8 628,685 - Dsui_0634 0.23 -1.6 628,701 + Dsui_0634 0.25 -0.4 628,701 + Dsui_0634 0.25 +0.4 628,776 - Dsui_0634 0.33 -2.4 628,796 + Dsui_0634 0.35 -1.2 628,806 + Dsui_0634 0.36 -3.0 628,819 - Dsui_0634 0.38 -0.6 628,845 - Dsui_0634 0.41 +0.4 628,982 + Dsui_0634 0.56 +0.4 628,987 + Dsui_0634 0.56 -1.8 628,990 - Dsui_0634 0.56 -1.9 628,990 - Dsui_0634 0.56 +0.4 629,188 - Dsui_0634 0.78 -0.9 629,359 - +0.4
Or see this region's nucleotide sequence