Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0576 and Dsui_0577 overlap by 8 nucleotides Dsui_0577 and Dsui_0578 are separated by 14 nucleotides Dsui_0578 and Dsui_0579 are separated by 211 nucleotides
Dsui_0576: Dsui_0576 - electron transfer flavoprotein, beta subunit, at 574,295 to 575,140
_0576
Dsui_0577: Dsui_0577 - Nitrogen fixation protein NifW, at 575,133 to 575,465
_0577
Dsui_0578: Dsui_0578 - homocitrate synthase NifV, at 575,480 to 576,634
_0578
Dsui_0579: Dsui_0579 - putative permease, at 576,846 to 577,721
_0579
Position (kb) 575
576
577 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 574.519 kb on + strand, within Dsui_0576 at 574.591 kb on - strand, within Dsui_0576 at 574.592 kb on - strand, within Dsui_0576 at 575.106 kb on + strand at 575.116 kb on + strand at 575.124 kb on - strand at 575.135 kb on + strand at 575.150 kb on + strand at 575.150 kb on + strand at 575.195 kb on - strand, within Dsui_0577 at 575.329 kb on + strand, within Dsui_0577 at 575.348 kb on + strand, within Dsui_0577 at 575.348 kb on + strand, within Dsui_0577 at 575.467 kb on + strand at 575.470 kb on - strand at 575.556 kb on - strand at 575.578 kb on - strand at 575.604 kb on - strand, within Dsui_0578 at 575.628 kb on - strand, within Dsui_0578 at 575.706 kb on + strand, within Dsui_0578 at 575.962 kb on + strand, within Dsui_0578 at 575.977 kb on - strand, within Dsui_0578 at 575.982 kb on + strand, within Dsui_0578 at 575.990 kb on - strand, within Dsui_0578 at 576.216 kb on - strand, within Dsui_0578 at 576.271 kb on - strand, within Dsui_0578 at 576.399 kb on - strand, within Dsui_0578 at 576.424 kb on + strand, within Dsui_0578 at 576.431 kb on - strand, within Dsui_0578 at 576.450 kb on - strand, within Dsui_0578 at 576.609 kb on + strand at 576.649 kb on - strand at 576.787 kb on - strand at 576.788 kb on - strand at 576.789 kb on + strand at 576.789 kb on + strand at 576.906 kb on - strand at 576.927 kb on + strand at 576.999 kb on + strand, within Dsui_0579 at 577.006 kb on + strand, within Dsui_0579 at 577.194 kb on + strand, within Dsui_0579 at 577.194 kb on + strand, within Dsui_0579 at 577.315 kb on - strand, within Dsui_0579 at 577.342 kb on - strand, within Dsui_0579 at 577.360 kb on - strand, within Dsui_0579 at 577.373 kb on - strand, within Dsui_0579 at 577.457 kb on - strand, within Dsui_0579 at 577.482 kb on - strand, within Dsui_0579
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 574,519 + Dsui_0576 0.26 -1.6 574,591 - Dsui_0576 0.35 -1.6 574,592 - Dsui_0576 0.35 +0.4 575,106 + -1.6 575,116 + +0.4 575,124 - +0.4 575,135 + -0.2 575,150 + +0.4 575,150 + +0.4 575,195 - Dsui_0577 0.19 -2.8 575,329 + Dsui_0577 0.59 -1.2 575,348 + Dsui_0577 0.65 +0.4 575,348 + Dsui_0577 0.65 +0.4 575,467 + -0.6 575,470 - -3.1 575,556 - -1.2 575,578 - -0.6 575,604 - Dsui_0578 0.11 -0.6 575,628 - Dsui_0578 0.13 +0.4 575,706 + Dsui_0578 0.20 +0.4 575,962 + Dsui_0578 0.42 -2.2 575,977 - Dsui_0578 0.43 -0.6 575,982 + Dsui_0578 0.43 -0.6 575,990 - Dsui_0578 0.44 -1.9 576,216 - Dsui_0578 0.64 -1.2 576,271 - Dsui_0578 0.68 -1.2 576,399 - Dsui_0578 0.80 +0.4 576,424 + Dsui_0578 0.82 -1.9 576,431 - Dsui_0578 0.82 -0.6 576,450 - Dsui_0578 0.84 +0.4 576,609 + +0.4 576,649 - -0.6 576,787 - -0.6 576,788 - -0.3 576,789 + +0.4 576,789 + -0.6 576,906 - -0.2 576,927 + -0.6 576,999 + Dsui_0579 0.17 -0.6 577,006 + Dsui_0579 0.18 -1.9 577,194 + Dsui_0579 0.40 +0.4 577,194 + Dsui_0579 0.40 -0.6 577,315 - Dsui_0579 0.54 +0.3 577,342 - Dsui_0579 0.57 -0.2 577,360 - Dsui_0579 0.59 -0.3 577,373 - Dsui_0579 0.60 -0.0 577,457 - Dsui_0579 0.70 -0.3 577,482 - Dsui_0579 0.73 -0.2
Or see this region's nucleotide sequence