Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0565 and Dsui_0566 are separated by 38 nucleotides Dsui_0566 and Dsui_0567 overlap by 4 nucleotides Dsui_0567 and Dsui_0568 are separated by 168 nucleotides
Dsui_0565: Dsui_0565 - hypothetical protein, at 565,253 to 565,639
_0565
Dsui_0566: Dsui_0566 - putative molybdenum utilization protein ModD, at 565,678 to 566,568
_0566
Dsui_0567: Dsui_0567 - molybdenum-pterin binding domain protein, at 566,565 to 567,395
_0567
Dsui_0568: Dsui_0568 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 567,564 to 569,480
_0568
Position (kb) 566
567
568 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 565.573 kb on - strand, within Dsui_0565 at 565.587 kb on + strand at 565.984 kb on + strand at 565.992 kb on - strand, within Dsui_0566 at 566.194 kb on - strand, within Dsui_0566 at 566.276 kb on - strand at 566.332 kb on + strand at 566.340 kb on - strand, within Dsui_0566 at 566.562 kb on + strand at 566.792 kb on - strand, within Dsui_0567 at 566.851 kb on - strand at 566.913 kb on - strand, within Dsui_0567 at 566.987 kb on + strand at 567.157 kb on + strand at 567.275 kb on - strand at 567.360 kb on - strand at 567.360 kb on - strand at 567.360 kb on - strand at 567.360 kb on - strand at 567.390 kb on - strand at 567.440 kb on + strand at 567.453 kb on - strand at 567.695 kb on + strand at 567.840 kb on - strand, within Dsui_0568 at 567.880 kb on + strand, within Dsui_0568 at 567.948 kb on - strand at 567.979 kb on - strand, within Dsui_0568 at 568.225 kb on - strand, within Dsui_0568 at 568.313 kb on + strand, within Dsui_0568 at 568.313 kb on + strand at 568.321 kb on - strand, within Dsui_0568 at 568.359 kb on - strand, within Dsui_0568
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 565,573 - Dsui_0565 0.83 -0.6 565,587 + +0.4 565,984 + -0.6 565,992 - Dsui_0566 0.35 -2.9 566,194 - Dsui_0566 0.58 -1.6 566,276 - +0.4 566,332 + -1.2 566,340 - Dsui_0566 0.74 +0.4 566,562 + -2.4 566,792 - Dsui_0567 0.27 -0.6 566,851 - +0.4 566,913 - Dsui_0567 0.42 -2.4 566,987 + +0.4 567,157 + +0.4 567,275 - -0.6 567,360 - +0.4 567,360 - +0.4 567,360 - -0.6 567,360 - -1.9 567,390 - -1.2 567,440 + +0.4 567,453 - +0.4 567,695 + -2.2 567,840 - Dsui_0568 0.14 +1.0 567,880 + Dsui_0568 0.16 +0.4 567,948 - -0.6 567,979 - Dsui_0568 0.22 -0.6 568,225 - Dsui_0568 0.34 -1.2 568,313 + Dsui_0568 0.39 -0.6 568,313 + -0.6 568,321 - Dsui_0568 0.39 -1.8 568,359 - Dsui_0568 0.41 -0.0
Or see this region's nucleotide sequence