Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0450 and Dsui_0451 are separated by 15 nucleotides Dsui_0451 and Dsui_0452 are separated by 8 nucleotides Dsui_0452 and Dsui_0453 are separated by 7 nucleotides Dsui_0453 and Dsui_0454 overlap by 17 nucleotides Dsui_0454 and Dsui_0455 are separated by 3 nucleotides
Dsui_0450: Dsui_0450 - MAF protein, at 457,030 to 457,650
_0450
Dsui_0451: Dsui_0451 - hypothetical protein, at 457,666 to 458,148
_0451
Dsui_0452: Dsui_0452 - iojap-like ribosome-associated protein, at 458,157 to 458,528
_0452
Dsui_0453: Dsui_0453 - nicotinate/nicotinamide nucleotide adenylyltransferase, at 458,536 to 459,210
_0453
Dsui_0454: Dsui_0454 - hypothetical protein, at 459,194 to 460,024
_0454
Dsui_0455: Dsui_0455 - putative integral membrane protein, at 460,028 to 460,786
_0455
Position (kb) 458
459
460 Strain fitness (log2 ratio) -2
-1
0
1 at 457.559 kb on + strand, within Dsui_0450 at 457.645 kb on + strand at 457.712 kb on + strand at 457.720 kb on - strand, within Dsui_0451 at 457.720 kb on - strand, within Dsui_0451 at 457.739 kb on - strand, within Dsui_0451 at 457.739 kb on - strand, within Dsui_0451 at 457.758 kb on + strand at 457.758 kb on + strand, within Dsui_0451 at 457.766 kb on - strand, within Dsui_0451 at 457.766 kb on - strand, within Dsui_0451 at 457.917 kb on - strand, within Dsui_0451 at 457.933 kb on - strand, within Dsui_0451 at 457.965 kb on - strand, within Dsui_0451 at 458.033 kb on - strand, within Dsui_0451 at 458.035 kb on + strand at 458.080 kb on - strand, within Dsui_0451 at 458.082 kb on + strand, within Dsui_0451 at 458.092 kb on + strand, within Dsui_0451 at 458.100 kb on - strand at 458.379 kb on + strand at 458.441 kb on + strand, within Dsui_0452 at 458.442 kb on - strand, within Dsui_0452 at 458.449 kb on - strand, within Dsui_0452 at 458.473 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.491 kb on - strand at 459.200 kb on - strand at 459.200 kb on - strand at 459.231 kb on - strand at 459.431 kb on - strand, within Dsui_0454 at 459.543 kb on - strand, within Dsui_0454 at 459.942 kb on - strand at 459.973 kb on - strand at 460.021 kb on + strand at 460.059 kb on + strand at 460.067 kb on - strand at 460.067 kb on - strand at 460.140 kb on + strand at 460.148 kb on - strand, within Dsui_0455
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 457,559 + Dsui_0450 0.85 -2.4 457,645 + -0.6 457,712 + -1.2 457,720 - Dsui_0451 0.11 -0.4 457,720 - Dsui_0451 0.11 -0.1 457,739 - Dsui_0451 0.15 -0.1 457,739 - Dsui_0451 0.15 +0.1 457,758 + +0.4 457,758 + Dsui_0451 0.19 -2.2 457,766 - Dsui_0451 0.21 -0.1 457,766 - Dsui_0451 0.21 -0.1 457,917 - Dsui_0451 0.52 -0.5 457,933 - Dsui_0451 0.55 +0.1 457,965 - Dsui_0451 0.62 -0.2 458,033 - Dsui_0451 0.76 +0.1 458,035 + +0.4 458,080 - Dsui_0451 0.86 +0.1 458,082 + Dsui_0451 0.86 -2.4 458,092 + Dsui_0451 0.88 -1.6 458,100 - -0.5 458,379 + +0.4 458,441 + Dsui_0452 0.76 -0.6 458,442 - Dsui_0452 0.77 -0.3 458,449 - Dsui_0452 0.78 -0.2 458,473 + Dsui_0452 0.85 +0.4 458,483 + Dsui_0452 0.88 -1.9 458,483 + -0.6 458,483 + Dsui_0452 0.88 +0.4 458,483 + Dsui_0452 0.88 -1.9 458,491 - -0.1 459,200 - -2.2 459,200 - -0.7 459,231 - -1.6 459,431 - Dsui_0454 0.29 -1.3 459,543 - Dsui_0454 0.42 -1.9 459,942 - -2.6 459,973 - -2.2 460,021 + +0.3 460,059 + -1.7 460,067 - -0.8 460,067 - -0.1 460,140 + +0.3 460,148 - Dsui_0455 0.16 -0.4
Or see this region's nucleotide sequence