Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0275 and Dsui_0276 overlap by 4 nucleotides Dsui_0276 and Dsui_0277 are separated by 9 nucleotides Dsui_0277 and Dsui_0278 are separated by 10 nucleotides
Dsui_0275: Dsui_0275 - conserved hypothetical protein, proteobacterial, at 276,530 to 277,366
_0275
Dsui_0276: Dsui_0276 - hypothetical protein, at 277,363 to 277,503
_0276
Dsui_0277: Dsui_0277 - K+-transporting ATPase, C subunit, at 277,513 to 278,088
_0277
Dsui_0278: Dsui_0278 - K+-transporting ATPase, B subunit, at 278,099 to 280,177
_0278
Position (kb) 277
278
279 Strain fitness (log2 ratio) -1
0
1 at 276.582 kb on - strand at 276.811 kb on + strand, within Dsui_0275 at 276.827 kb on + strand at 276.860 kb on - strand at 276.895 kb on + strand, within Dsui_0275 at 276.897 kb on - strand, within Dsui_0275 at 276.903 kb on - strand, within Dsui_0275 at 276.903 kb on - strand at 276.903 kb on - strand at 276.934 kb on + strand at 276.942 kb on - strand, within Dsui_0275 at 277.035 kb on - strand, within Dsui_0275 at 277.058 kb on - strand at 277.058 kb on - strand, within Dsui_0275 at 277.079 kb on + strand, within Dsui_0275 at 277.161 kb on - strand, within Dsui_0275 at 277.193 kb on + strand at 277.222 kb on + strand at 277.225 kb on - strand at 277.225 kb on - strand, within Dsui_0275 at 277.263 kb on - strand at 277.280 kb on + strand, within Dsui_0275 at 277.350 kb on - strand at 277.561 kb on - strand at 277.595 kb on + strand at 277.711 kb on + strand at 277.763 kb on + strand at 277.819 kb on - strand, within Dsui_0277 at 277.866 kb on - strand, within Dsui_0277 at 277.967 kb on + strand, within Dsui_0277 at 278.021 kb on - strand at 278.049 kb on + strand at 278.062 kb on - strand at 278.102 kb on + strand at 278.105 kb on - strand at 278.107 kb on + strand at 278.161 kb on - strand at 278.163 kb on + strand at 278.182 kb on - strand at 278.387 kb on + strand at 278.387 kb on + strand, within Dsui_0278 at 278.387 kb on + strand at 278.417 kb on + strand, within Dsui_0278 at 278.511 kb on - strand, within Dsui_0278 at 278.548 kb on - strand, within Dsui_0278 at 278.674 kb on - strand at 278.758 kb on - strand, within Dsui_0278 at 278.872 kb on - strand at 278.933 kb on + strand, within Dsui_0278 at 279.017 kb on + strand, within Dsui_0278
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 276,582 - +0.4 276,811 + Dsui_0275 0.34 -1.6 276,827 + +0.4 276,860 - -0.6 276,895 + Dsui_0275 0.44 +0.4 276,897 - Dsui_0275 0.44 +0.4 276,903 - Dsui_0275 0.45 +0.4 276,903 - +0.4 276,903 - +0.4 276,934 + +0.4 276,942 - Dsui_0275 0.49 -0.6 277,035 - Dsui_0275 0.60 -1.6 277,058 - +0.4 277,058 - Dsui_0275 0.63 -1.6 277,079 + Dsui_0275 0.66 -1.2 277,161 - Dsui_0275 0.75 +0.4 277,193 + +0.4 277,222 + -0.6 277,225 - +0.4 277,225 - Dsui_0275 0.83 -1.2 277,263 - +0.4 277,280 + Dsui_0275 0.90 +0.4 277,350 - +0.4 277,561 - +0.4 277,595 + +0.4 277,711 + +0.4 277,763 + +0.4 277,819 - Dsui_0277 0.53 +0.4 277,866 - Dsui_0277 0.61 -0.6 277,967 + Dsui_0277 0.79 -1.2 278,021 - -1.2 278,049 + +0.4 278,062 - -0.6 278,102 + +0.4 278,105 - +0.4 278,107 + +0.4 278,161 - -1.2 278,163 + -0.6 278,182 - +0.4 278,387 + +0.4 278,387 + Dsui_0278 0.14 -1.2 278,387 + +0.4 278,417 + Dsui_0278 0.15 -0.6 278,511 - Dsui_0278 0.20 -0.6 278,548 - Dsui_0278 0.22 +0.4 278,674 - +0.4 278,758 - Dsui_0278 0.32 -1.2 278,872 - -0.6 278,933 + Dsui_0278 0.40 -0.6 279,017 + Dsui_0278 0.44 +0.4
Or see this region's nucleotide sequence