Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27070

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27065 and BWI76_RS27070 are separated by 101 nucleotidesBWI76_RS27070 and BWI76_RS27075 are separated by 118 nucleotides BWI76_RS27065: BWI76_RS27065 - valine--pyruvate transaminase, at 5,616,666 to 5,617,925 _RS27065 BWI76_RS27070: BWI76_RS27070 - 4Fe-4S ferredoxin, at 5,618,027 to 5,618,515 _RS27070 BWI76_RS27075: BWI76_RS27075 - IclR family transcriptional regulator, at 5,618,634 to 5,619,452 _RS27075 Position (kb) 5618 5619Strain fitness (log2 ratio) -2 -1 0 1at 5617.140 kb on - strand, within BWI76_RS27065at 5617.234 kb on + strand, within BWI76_RS27065at 5617.350 kb on + strand, within BWI76_RS27065at 5617.506 kb on - strand, within BWI76_RS27065at 5617.524 kb on + strand, within BWI76_RS27065at 5617.575 kb on - strand, within BWI76_RS27065at 5617.696 kb on + strand, within BWI76_RS27065at 5617.697 kb on + strand, within BWI76_RS27065at 5617.705 kb on - strand, within BWI76_RS27065at 5617.763 kb on - strand, within BWI76_RS27065at 5617.903 kb on + strandat 5617.913 kb on + strandat 5617.969 kb on - strandat 5618.091 kb on + strand, within BWI76_RS27070at 5618.104 kb on - strandat 5618.185 kb on + strand, within BWI76_RS27070at 5618.224 kb on + strand, within BWI76_RS27070at 5618.234 kb on - strand, within BWI76_RS27070at 5618.255 kb on + strand, within BWI76_RS27070at 5618.413 kb on + strand, within BWI76_RS27070at 5618.413 kb on + strand, within BWI76_RS27070at 5618.421 kb on - strand, within BWI76_RS27070at 5618.423 kb on + strand, within BWI76_RS27070at 5618.431 kb on - strand, within BWI76_RS27070at 5618.431 kb on - strand, within BWI76_RS27070at 5618.431 kb on - strand, within BWI76_RS27070at 5618.638 kb on + strandat 5618.800 kb on + strand, within BWI76_RS27075at 5618.906 kb on - strand, within BWI76_RS27075at 5618.995 kb on + strand, within BWI76_RS27075at 5619.003 kb on + strand, within BWI76_RS27075at 5619.100 kb on - strand, within BWI76_RS27075at 5619.196 kb on - strand, within BWI76_RS27075at 5619.264 kb on + strand, within BWI76_RS27075at 5619.392 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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5,617,140 - BWI76_RS27065 0.38 -0.4
5,617,234 + BWI76_RS27065 0.45 -0.7
5,617,350 + BWI76_RS27065 0.54 -0.5
5,617,506 - BWI76_RS27065 0.67 +0.2
5,617,524 + BWI76_RS27065 0.68 -0.7
5,617,575 - BWI76_RS27065 0.72 -0.1
5,617,696 + BWI76_RS27065 0.82 +1.1
5,617,697 + BWI76_RS27065 0.82 +0.4
5,617,705 - BWI76_RS27065 0.82 +0.1
5,617,763 - BWI76_RS27065 0.87 -0.8
5,617,903 + +0.0
5,617,913 + +0.0
5,617,969 - -0.5
5,618,091 + BWI76_RS27070 0.13 +0.3
5,618,104 - -1.2
5,618,185 + BWI76_RS27070 0.32 +0.1
5,618,224 + BWI76_RS27070 0.40 -0.7
5,618,234 - BWI76_RS27070 0.42 +0.6
5,618,255 + BWI76_RS27070 0.47 -0.3
5,618,413 + BWI76_RS27070 0.79 -1.9
5,618,413 + BWI76_RS27070 0.79 +0.0
5,618,421 - BWI76_RS27070 0.81 -0.5
5,618,423 + BWI76_RS27070 0.81 +0.5
5,618,431 - BWI76_RS27070 0.83 +0.3
5,618,431 - BWI76_RS27070 0.83 +0.1
5,618,431 - BWI76_RS27070 0.83 -0.1
5,618,638 + -0.8
5,618,800 + BWI76_RS27075 0.20 -2.7
5,618,906 - BWI76_RS27075 0.33 -1.6
5,618,995 + BWI76_RS27075 0.44 -1.8
5,619,003 + BWI76_RS27075 0.45 -1.9
5,619,100 - BWI76_RS27075 0.57 +0.8
5,619,196 - BWI76_RS27075 0.69 -1.4
5,619,264 + BWI76_RS27075 0.77 -1.2
5,619,392 + -1.3

Or see this region's nucleotide sequence