Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23350 and BWI76_RS23355 are separated by 295 nucleotides BWI76_RS23355 and BWI76_RS23360 are separated by 125 nucleotides
BWI76_RS23350: BWI76_RS23350 - PTS system lactose/cellobiose family transporter subunit IIC, at 4,868,570 to 4,869,907
_RS23350
BWI76_RS23355: BWI76_RS23355 - LacI family transcriptional regulator, at 4,870,203 to 4,871,213
_RS23355
BWI76_RS23360: BWI76_RS23360 - diaminopimelate decarboxylase, at 4,871,339 to 4,872,601
_RS23360
Position (kb)
4870
4871
4872 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4869.206 kb on + strand, within BWI76_RS23350 at 4869.242 kb on + strand, within BWI76_RS23350 at 4869.250 kb on - strand, within BWI76_RS23350 at 4869.262 kb on + strand, within BWI76_RS23350 at 4869.564 kb on - strand, within BWI76_RS23350 at 4869.686 kb on + strand, within BWI76_RS23350 at 4869.694 kb on - strand, within BWI76_RS23350 at 4869.729 kb on - strand, within BWI76_RS23350 at 4869.840 kb on - strand at 4870.024 kb on + strand at 4870.513 kb on + strand, within BWI76_RS23355 at 4870.532 kb on - strand, within BWI76_RS23355 at 4870.705 kb on - strand, within BWI76_RS23355 at 4870.730 kb on - strand, within BWI76_RS23355 at 4870.884 kb on - strand, within BWI76_RS23355 at 4871.337 kb on + strand at 4871.385 kb on - strand at 4872.158 kb on + strand, within BWI76_RS23360
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,869,206 + BWI76_RS23350 0.48 -0.1 4,869,242 + BWI76_RS23350 0.50 -0.4 4,869,250 - BWI76_RS23350 0.51 +0.0 4,869,262 + BWI76_RS23350 0.52 +1.7 4,869,564 - BWI76_RS23350 0.74 +1.1 4,869,686 + BWI76_RS23350 0.83 -1.2 4,869,694 - BWI76_RS23350 0.84 +0.2 4,869,729 - BWI76_RS23350 0.87 +0.5 4,869,840 - -0.0 4,870,024 + -0.1 4,870,513 + BWI76_RS23355 0.31 +1.7 4,870,532 - BWI76_RS23355 0.33 -2.3 4,870,705 - BWI76_RS23355 0.50 -0.7 4,870,730 - BWI76_RS23355 0.52 -3.1 4,870,884 - BWI76_RS23355 0.67 -3.8 4,871,337 + -1.1 4,871,385 - -4.4 4,872,158 + BWI76_RS23360 0.65 -2.3
Or see this region's nucleotide sequence