Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19680 and BWI76_RS19685 are separated by 303 nucleotides BWI76_RS19685 and BWI76_RS19690 are separated by 158 nucleotides
BWI76_RS19680: BWI76_RS19680 - catecholate siderophore receptor CirA, at 4,111,357 to 4,113,330
_RS19680
BWI76_RS19685: BWI76_RS19685 - lysine transporter, at 4,113,634 to 4,115,103
_RS19685
BWI76_RS19690: BWI76_RS19690 - LysR family transcriptional regulator, at 4,115,262 to 4,116,128
_RS19690
Position (kb)
4113
4114
4115
4116 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4112.819 kb on - strand, within BWI76_RS19680 at 4112.907 kb on - strand, within BWI76_RS19680 at 4113.144 kb on - strand at 4113.154 kb on - strand at 4113.320 kb on + strand at 4113.450 kb on + strand at 4113.607 kb on + strand at 4113.697 kb on - strand at 4113.753 kb on - strand at 4113.815 kb on - strand, within BWI76_RS19685 at 4113.858 kb on + strand, within BWI76_RS19685 at 4113.935 kb on - strand, within BWI76_RS19685 at 4114.351 kb on - strand, within BWI76_RS19685 at 4114.361 kb on + strand, within BWI76_RS19685 at 4114.706 kb on - strand, within BWI76_RS19685 at 4114.810 kb on - strand, within BWI76_RS19685 at 4114.820 kb on + strand, within BWI76_RS19685 at 4114.935 kb on + strand, within BWI76_RS19685 at 4114.943 kb on - strand, within BWI76_RS19685 at 4115.149 kb on - strand at 4115.558 kb on - strand, within BWI76_RS19690 at 4116.025 kb on - strand, within BWI76_RS19690
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,112,819 - BWI76_RS19680 0.74 -0.1 4,112,907 - BWI76_RS19680 0.79 +0.6 4,113,144 - +1.1 4,113,154 - +0.1 4,113,320 + +0.6 4,113,450 + -0.0 4,113,607 + +1.3 4,113,697 - -1.6 4,113,753 - -0.9 4,113,815 - BWI76_RS19685 0.12 -0.3 4,113,858 + BWI76_RS19685 0.15 -2.4 4,113,935 - BWI76_RS19685 0.20 -0.3 4,114,351 - BWI76_RS19685 0.49 -0.9 4,114,361 + BWI76_RS19685 0.49 -2.4 4,114,706 - BWI76_RS19685 0.73 -1.9 4,114,810 - BWI76_RS19685 0.80 -3.5 4,114,820 + BWI76_RS19685 0.81 -1.9 4,114,935 + BWI76_RS19685 0.89 -0.4 4,114,943 - BWI76_RS19685 0.89 -0.3 4,115,149 - -0.9 4,115,558 - BWI76_RS19690 0.34 +0.7 4,116,025 - BWI76_RS19690 0.88 +0.3
Or see this region's nucleotide sequence