Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17925 and BWI76_RS17930 are separated by 190 nucleotides BWI76_RS17930 and BWI76_RS17935 are separated by 41 nucleotides BWI76_RS17935 and BWI76_RS17940 overlap by 39 nucleotides BWI76_RS17940 and BWI76_RS17945 are separated by 461 nucleotides BWI76_RS17945 and BWI76_RS17950 are separated by 74 nucleotides
BWI76_RS17925: BWI76_RS17925 - peptidoglycan synthase, at 3,726,634 to 3,728,379
_RS17925
BWI76_RS17930: BWI76_RS17930 - cold-shock protein CspC, at 3,728,570 to 3,728,779
_RS17930
BWI76_RS17935: BWI76_RS17935 - DUF2627 domain-containing protein, at 3,728,821 to 3,728,937
_RS17935
BWI76_RS17940: BWI76_RS17940 - hypothetical protein, at 3,728,899 to 3,729,093
_RS17940
BWI76_RS17945: BWI76_RS17945 - hypothetical protein, at 3,729,555 to 3,729,845
_RS17945
BWI76_RS17950: BWI76_RS17950 - PhoP regulon feedback inhibition membrane protein MgrB, at 3,729,920 to 3,730,063
_RS17950
Position (kb)
3728
3729
3730 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3727.943 kb on - strand, within BWI76_RS17925 at 3727.967 kb on + strand, within BWI76_RS17925 at 3728.292 kb on + strand at 3728.333 kb on - strand at 3728.606 kb on - strand, within BWI76_RS17930 at 3728.684 kb on - strand, within BWI76_RS17930 at 3728.687 kb on - strand, within BWI76_RS17930 at 3728.733 kb on + strand, within BWI76_RS17930 at 3728.741 kb on - strand, within BWI76_RS17930 at 3728.763 kb on + strand at 3728.771 kb on - strand at 3728.771 kb on - strand at 3728.771 kb on - strand at 3728.797 kb on - strand at 3728.826 kb on - strand at 3728.860 kb on + strand, within BWI76_RS17935 at 3728.868 kb on - strand, within BWI76_RS17935 at 3728.868 kb on - strand, within BWI76_RS17935 at 3728.913 kb on - strand at 3728.943 kb on + strand, within BWI76_RS17940 at 3728.943 kb on - strand, within BWI76_RS17940 at 3728.946 kb on - strand, within BWI76_RS17940 at 3728.951 kb on - strand, within BWI76_RS17940 at 3728.951 kb on - strand, within BWI76_RS17940 at 3728.954 kb on - strand, within BWI76_RS17940 at 3729.014 kb on + strand, within BWI76_RS17940 at 3729.014 kb on + strand, within BWI76_RS17940 at 3729.014 kb on + strand, within BWI76_RS17940 at 3729.014 kb on + strand, within BWI76_RS17940 at 3729.014 kb on + strand at 3729.014 kb on + strand, within BWI76_RS17940 at 3729.014 kb on + strand, within BWI76_RS17940 at 3729.022 kb on - strand, within BWI76_RS17940 at 3729.022 kb on - strand, within BWI76_RS17940 at 3729.022 kb on - strand, within BWI76_RS17940 at 3729.022 kb on - strand, within BWI76_RS17940 at 3729.022 kb on - strand, within BWI76_RS17940 at 3729.022 kb on - strand, within BWI76_RS17940 at 3729.041 kb on - strand, within BWI76_RS17940 at 3729.057 kb on + strand, within BWI76_RS17940 at 3729.156 kb on - strand at 3729.185 kb on - strand at 3729.202 kb on + strand at 3729.213 kb on + strand at 3729.235 kb on - strand at 3729.317 kb on + strand at 3729.317 kb on + strand at 3729.325 kb on - strand at 3729.352 kb on + strand at 3729.362 kb on + strand at 3729.362 kb on + strand at 3729.365 kb on + strand at 3729.370 kb on - strand at 3729.370 kb on - strand at 3729.388 kb on - strand at 3729.442 kb on + strand at 3729.442 kb on + strand at 3729.512 kb on + strand at 3729.527 kb on + strand at 3729.527 kb on + strand at 3729.527 kb on - strand at 3729.535 kb on - strand at 3729.542 kb on + strand at 3729.553 kb on + strand at 3729.553 kb on + strand at 3729.553 kb on + strand at 3729.561 kb on - strand at 3729.561 kb on - strand at 3729.561 kb on - strand at 3729.561 kb on - strand at 3729.561 kb on - strand at 3729.561 kb on - strand at 3729.561 kb on - strand at 3729.780 kb on - strand, within BWI76_RS17945 at 3729.805 kb on - strand, within BWI76_RS17945 at 3729.915 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,727,943 - BWI76_RS17925 0.75 -0.4 3,727,967 + BWI76_RS17925 0.76 -0.3 3,728,292 + +0.2 3,728,333 - +0.8 3,728,606 - BWI76_RS17930 0.17 +0.5 3,728,684 - BWI76_RS17930 0.54 +0.5 3,728,687 - BWI76_RS17930 0.56 +1.2 3,728,733 + BWI76_RS17930 0.78 +0.1 3,728,741 - BWI76_RS17930 0.81 +0.5 3,728,763 + +1.6 3,728,771 - +0.6 3,728,771 - +1.2 3,728,771 - +0.2 3,728,797 - +0.4 3,728,826 - +0.7 3,728,860 + BWI76_RS17935 0.33 +0.3 3,728,868 - BWI76_RS17935 0.40 +0.4 3,728,868 - BWI76_RS17935 0.40 +0.2 3,728,913 - +0.1 3,728,943 + BWI76_RS17940 0.23 +0.6 3,728,943 - BWI76_RS17940 0.23 +0.5 3,728,946 - BWI76_RS17940 0.24 +0.5 3,728,951 - BWI76_RS17940 0.27 +0.5 3,728,951 - BWI76_RS17940 0.27 +1.1 3,728,954 - BWI76_RS17940 0.28 +0.9 3,729,014 + BWI76_RS17940 0.59 +1.6 3,729,014 + BWI76_RS17940 0.59 +0.7 3,729,014 + BWI76_RS17940 0.59 +0.0 3,729,014 + BWI76_RS17940 0.59 -0.1 3,729,014 + +1.6 3,729,014 + BWI76_RS17940 0.59 -2.3 3,729,014 + BWI76_RS17940 0.59 +0.7 3,729,022 - BWI76_RS17940 0.63 +0.6 3,729,022 - BWI76_RS17940 0.63 +0.0 3,729,022 - BWI76_RS17940 0.63 +1.2 3,729,022 - BWI76_RS17940 0.63 -0.4 3,729,022 - BWI76_RS17940 0.63 +0.4 3,729,022 - BWI76_RS17940 0.63 +3.2 3,729,041 - BWI76_RS17940 0.73 +1.0 3,729,057 + BWI76_RS17940 0.81 -0.1 3,729,156 - -2.5 3,729,185 - +0.7 3,729,202 + -0.0 3,729,213 + +0.5 3,729,235 - -0.4 3,729,317 + -1.1 3,729,317 + -0.9 3,729,325 - +0.1 3,729,352 + +0.1 3,729,362 + +0.4 3,729,362 + -0.5 3,729,365 + -0.0 3,729,370 - -0.4 3,729,370 - -0.2 3,729,388 - +0.4 3,729,442 + +1.8 3,729,442 + +0.7 3,729,512 + +0.6 3,729,527 + -0.8 3,729,527 + -0.4 3,729,527 - +1.1 3,729,535 - -0.2 3,729,542 + +0.6 3,729,553 + -0.0 3,729,553 + +0.3 3,729,553 + +0.2 3,729,561 - +1.0 3,729,561 - +0.5 3,729,561 - +0.1 3,729,561 - -0.4 3,729,561 - +1.0 3,729,561 - -0.1 3,729,561 - -0.2 3,729,780 - BWI76_RS17945 0.77 +0.2 3,729,805 - BWI76_RS17945 0.86 -0.4 3,729,915 - -0.5
Or see this region's nucleotide sequence