Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12790 and BWI76_RS12795 are separated by 149 nucleotides BWI76_RS12795 and BWI76_RS12800 are separated by 195 nucleotides BWI76_RS12800 and BWI76_RS12805 overlap by 1 nucleotides BWI76_RS12805 and BWI76_RS12810 are separated by 7 nucleotides BWI76_RS12810 and BWI76_RS12815 are separated by 0 nucleotides
BWI76_RS12790: BWI76_RS12790 - lactate dehydrogenase, at 2,665,125 to 2,666,114
_RS12790
BWI76_RS12795: BWI76_RS12795 - DedA family protein, at 2,666,264 to 2,666,761
_RS12795
BWI76_RS12800: BWI76_RS12800 - hypothetical protein, at 2,666,957 to 2,669,596
_RS12800
BWI76_RS12805: BWI76_RS12805 - YnbE family lipoprotein, at 2,669,596 to 2,669,781
_RS12805
BWI76_RS12810: BWI76_RS12810 - hypothetical protein, at 2,669,789 to 2,670,112
_RS12810
BWI76_RS12815: BWI76_RS12815 - transcriptional regulator FeaR, at 2,670,113 to 2,671,021
_RS12815
Position (kb)
2666
2667
2668
2669
2670 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7
8 at 2666.276 kb on + strand at 2666.481 kb on - strand, within BWI76_RS12795 at 2666.612 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.794 kb on - strand at 2666.968 kb on + strand at 2667.125 kb on - strand at 2667.276 kb on - strand, within BWI76_RS12800 at 2667.594 kb on - strand, within BWI76_RS12800 at 2667.719 kb on + strand, within BWI76_RS12800 at 2668.310 kb on - strand, within BWI76_RS12800 at 2668.654 kb on - strand, within BWI76_RS12800 at 2668.975 kb on + strand, within BWI76_RS12800 at 2669.010 kb on + strand, within BWI76_RS12800 at 2669.147 kb on - strand, within BWI76_RS12800 at 2669.173 kb on + strand, within BWI76_RS12800 at 2669.337 kb on + strand at 2669.345 kb on - strand at 2670.529 kb on + strand, within BWI76_RS12815
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 2,666,276 + -0.5 2,666,481 - BWI76_RS12795 0.44 +0.4 2,666,612 - BWI76_RS12795 0.70 -0.2 2,666,640 - BWI76_RS12795 0.76 +0.0 2,666,640 - BWI76_RS12795 0.76 +0.4 2,666,640 - BWI76_RS12795 0.76 +0.2 2,666,640 - BWI76_RS12795 0.76 -0.4 2,666,640 - BWI76_RS12795 0.76 +0.2 2,666,794 - -0.3 2,666,968 + +0.6 2,667,125 - +0.2 2,667,276 - BWI76_RS12800 0.12 -0.2 2,667,594 - BWI76_RS12800 0.24 -1.2 2,667,719 + BWI76_RS12800 0.29 -0.4 2,668,310 - BWI76_RS12800 0.51 -0.1 2,668,654 - BWI76_RS12800 0.64 +8.1 2,668,975 + BWI76_RS12800 0.76 -1.1 2,669,010 + BWI76_RS12800 0.78 +0.1 2,669,147 - BWI76_RS12800 0.83 -0.7 2,669,173 + BWI76_RS12800 0.84 +1.1 2,669,337 + -0.0 2,669,345 - +0.2 2,670,529 + BWI76_RS12815 0.46 -0.5
Or see this region's nucleotide sequence