Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12675 and BWI76_RS12680 are separated by 47 nucleotides BWI76_RS12680 and BWI76_RS12685 are separated by 16 nucleotides
BWI76_RS12675: BWI76_RS12675 - putative UV protection and mutation protein, at 2,642,047 to 2,643,312
_RS12675
BWI76_RS12680: BWI76_RS12680 - oxidoreductase, at 2,643,360 to 2,644,427
_RS12680
BWI76_RS12685: BWI76_RS12685 - DeoR family transcriptional regulator, at 2,644,444 to 2,645,187
_RS12685
Position (kb)
2643
2644
2645 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2642.454 kb on + strand, within BWI76_RS12675 at 2642.489 kb on - strand, within BWI76_RS12675 at 2642.650 kb on + strand, within BWI76_RS12675 at 2642.739 kb on + strand, within BWI76_RS12675 at 2642.744 kb on + strand, within BWI76_RS12675 at 2642.760 kb on + strand, within BWI76_RS12675 at 2642.930 kb on - strand, within BWI76_RS12675 at 2643.057 kb on - strand, within BWI76_RS12675 at 2643.131 kb on + strand, within BWI76_RS12675 at 2643.212 kb on - strand at 2643.232 kb on - strand at 2643.366 kb on - strand at 2643.645 kb on + strand, within BWI76_RS12680 at 2643.766 kb on + strand, within BWI76_RS12680 at 2644.397 kb on + strand at 2644.521 kb on - strand, within BWI76_RS12685 at 2645.307 kb on + strand at 2645.348 kb on + strand at 2645.362 kb on + strand at 2645.362 kb on - strand at 2645.370 kb on - strand at 2645.370 kb on - strand at 2645.370 kb on - strand at 2645.386 kb on + strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.404 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 2,642,454 + BWI76_RS12675 0.32 -0.1 2,642,489 - BWI76_RS12675 0.35 +0.4 2,642,650 + BWI76_RS12675 0.48 -0.8 2,642,739 + BWI76_RS12675 0.55 -0.2 2,642,744 + BWI76_RS12675 0.55 +1.0 2,642,760 + BWI76_RS12675 0.56 +0.1 2,642,930 - BWI76_RS12675 0.70 +0.3 2,643,057 - BWI76_RS12675 0.80 -0.2 2,643,131 + BWI76_RS12675 0.86 -0.1 2,643,212 - -0.7 2,643,232 - -0.0 2,643,366 - -0.0 2,643,645 + BWI76_RS12680 0.27 -0.8 2,643,766 + BWI76_RS12680 0.38 -1.6 2,644,397 + +0.2 2,644,521 - BWI76_RS12685 0.10 +1.0 2,645,307 + -0.4 2,645,348 + -1.9 2,645,362 + +0.3 2,645,362 - -0.1 2,645,370 - +0.9 2,645,370 - -1.6 2,645,370 - -0.5 2,645,386 + -2.9 2,645,394 - +0.2 2,645,394 - +0.7 2,645,394 - +0.7 2,645,394 - +2.0 2,645,394 - -1.0 2,645,394 - +0.9 2,645,394 - -0.8 2,645,394 - +0.3 2,645,404 - +0.7
Or see this region's nucleotide sequence