Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19635 and AZOBR_RS19640 are separated by 143 nucleotides AZOBR_RS19640 and AZOBR_RS19645 are separated by 158 nucleotides AZOBR_RS19645 and AZOBR_RS19650 overlap by 4 nucleotides
AZOBR_RS19635: AZOBR_RS19635 - succinate-semialdehyde dehydrogenase, at 1,174,336 to 1,175,793
_RS19635
AZOBR_RS19640: AZOBR_RS19640 - aldehyde dehydrogenase, at 1,175,937 to 1,176,521
_RS19640
AZOBR_RS19645: AZOBR_RS19645 - polyamine ABC transporter permease, at 1,176,680 to 1,177,510
_RS19645
AZOBR_RS19650: AZOBR_RS19650 - polyamine ABC transporter substrate-binding protein, at 1,177,507 to 1,178,769
_RS19650
Position (kb) 1175
1176
1177 Strain fitness (log2 ratio) -2
-1
0
1 at 1175.176 kb on - strand, within AZOBR_RS19635 at 1175.754 kb on - strand at 1175.754 kb on - strand at 1175.832 kb on + strand at 1176.297 kb on + strand, within AZOBR_RS19640 at 1176.297 kb on + strand, within AZOBR_RS19640 at 1176.298 kb on - strand, within AZOBR_RS19640 at 1176.298 kb on - strand, within AZOBR_RS19640 at 1176.429 kb on + strand, within AZOBR_RS19640 at 1176.430 kb on - strand, within AZOBR_RS19640 at 1176.514 kb on - strand at 1176.514 kb on - strand at 1176.514 kb on - strand at 1176.533 kb on + strand at 1176.533 kb on + strand at 1176.533 kb on + strand at 1176.534 kb on - strand at 1176.566 kb on + strand at 1176.567 kb on - strand at 1176.567 kb on - strand at 1176.961 kb on - strand, within AZOBR_RS19645 at 1177.090 kb on - strand, within AZOBR_RS19645 at 1177.125 kb on + strand, within AZOBR_RS19645 at 1177.125 kb on + strand, within AZOBR_RS19645 at 1177.125 kb on + strand, within AZOBR_RS19645 at 1177.126 kb on - strand, within AZOBR_RS19645 at 1177.332 kb on + strand, within AZOBR_RS19645 at 1177.363 kb on - strand, within AZOBR_RS19645
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 1,175,176 - AZOBR_RS19635 0.58 -0.0 1,175,754 - +0.4 1,175,754 - +0.6 1,175,832 + -1.0 1,176,297 + AZOBR_RS19640 0.62 -0.2 1,176,297 + AZOBR_RS19640 0.62 -1.0 1,176,298 - AZOBR_RS19640 0.62 -0.9 1,176,298 - AZOBR_RS19640 0.62 -1.0 1,176,429 + AZOBR_RS19640 0.84 -0.4 1,176,430 - AZOBR_RS19640 0.84 -0.4 1,176,514 - -0.3 1,176,514 - -1.3 1,176,514 - -0.3 1,176,533 + +0.2 1,176,533 + -0.9 1,176,533 + -0.2 1,176,534 - -0.1 1,176,566 + +0.1 1,176,567 - -0.6 1,176,567 - -0.0 1,176,961 - AZOBR_RS19645 0.34 -2.4 1,177,090 - AZOBR_RS19645 0.49 -0.9 1,177,125 + AZOBR_RS19645 0.54 -0.1 1,177,125 + AZOBR_RS19645 0.54 -2.3 1,177,125 + AZOBR_RS19645 0.54 -0.3 1,177,126 - AZOBR_RS19645 0.54 -0.3 1,177,332 + AZOBR_RS19645 0.78 -0.4 1,177,363 - AZOBR_RS19645 0.82 +0.8
Or see this region's nucleotide sequence