Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09370 and AZOBR_RS09375 are separated by 151 nucleotides AZOBR_RS09375 and AZOBR_RS09380 are separated by 322 nucleotides AZOBR_RS09380 and AZOBR_RS09385 are separated by 83 nucleotides
AZOBR_RS09370: AZOBR_RS09370 - exported protein of unknown function, at 1,958,078 to 1,958,404
_RS09370
AZOBR_RS09375: AZOBR_RS09375 - hypothetical protein, at 1,958,556 to 1,958,780
_RS09375
AZOBR_RS09380: AZOBR_RS09380 - hypothetical protein, at 1,959,103 to 1,960,308
_RS09380
AZOBR_RS09385: AZOBR_RS09385 - hypothetical protein, at 1,960,392 to 1,962,203
_RS09385
Position (kb) 1959
1960
1961 Strain fitness (log2 ratio) -1
0
1
2 at 1958.411 kb on + strand at 1958.411 kb on + strand at 1958.412 kb on - strand at 1958.653 kb on + strand, within AZOBR_RS09375 at 1958.653 kb on + strand, within AZOBR_RS09375 at 1958.663 kb on - strand, within AZOBR_RS09375 at 1958.663 kb on - strand, within AZOBR_RS09375 at 1958.698 kb on + strand, within AZOBR_RS09375 at 1958.884 kb on - strand at 1959.886 kb on + strand, within AZOBR_RS09380 at 1959.886 kb on + strand, within AZOBR_RS09380 at 1959.919 kb on + strand, within AZOBR_RS09380 at 1959.919 kb on + strand, within AZOBR_RS09380 at 1959.976 kb on + strand, within AZOBR_RS09380 at 1959.976 kb on + strand, within AZOBR_RS09380 at 1959.977 kb on - strand, within AZOBR_RS09380 at 1959.982 kb on + strand, within AZOBR_RS09380 at 1959.982 kb on + strand, within AZOBR_RS09380 at 1960.019 kb on - strand, within AZOBR_RS09380 at 1960.501 kb on - strand at 1960.791 kb on + strand, within AZOBR_RS09385 at 1960.792 kb on - strand, within AZOBR_RS09385
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 1,958,411 + +0.5 1,958,411 + +0.9 1,958,412 - +1.9 1,958,653 + AZOBR_RS09375 0.43 +0.6 1,958,653 + AZOBR_RS09375 0.43 +0.1 1,958,663 - AZOBR_RS09375 0.48 +0.9 1,958,663 - AZOBR_RS09375 0.48 +0.5 1,958,698 + AZOBR_RS09375 0.63 +0.7 1,958,884 - +0.7 1,959,886 + AZOBR_RS09380 0.65 +0.4 1,959,886 + AZOBR_RS09380 0.65 -0.4 1,959,919 + AZOBR_RS09380 0.68 -0.1 1,959,919 + AZOBR_RS09380 0.68 +0.1 1,959,976 + AZOBR_RS09380 0.72 +0.4 1,959,976 + AZOBR_RS09380 0.72 +0.6 1,959,977 - AZOBR_RS09380 0.72 +0.9 1,959,982 + AZOBR_RS09380 0.73 +0.9 1,959,982 + AZOBR_RS09380 0.73 +0.1 1,960,019 - AZOBR_RS09380 0.76 +0.6 1,960,501 - +1.3 1,960,791 + AZOBR_RS09385 0.22 +1.0 1,960,792 - AZOBR_RS09385 0.22 +0.8
Or see this region's nucleotide sequence