Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS03360

Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS03360 and AZOBR_RS03365 overlap by 4 nucleotides AZOBR_RS03360: AZOBR_RS03360 - glycosyl transferase family 1, at 711,791 to 712,921 _RS03360 AZOBR_RS03365: AZOBR_RS03365 - glycosyl transferase, at 712,918 to 714,189 _RS03365 Position (kb) 711 712 713Strain fitness (log2 ratio) -1 0 1 2at 710.827 kb on - strandat 710.827 kb on - strandat 710.928 kb on + strandat 710.929 kb on - strandat 710.929 kb on - strandat 710.968 kb on - strandat 711.238 kb on - strandat 711.417 kb on + strandat 711.417 kb on + strandat 711.418 kb on - strandat 711.418 kb on - strandat 711.450 kb on + strandat 711.450 kb on + strandat 711.450 kb on + strandat 711.451 kb on - strandat 711.532 kb on - strandat 711.532 kb on - strandat 712.266 kb on + strand, within AZOBR_RS03360at 712.407 kb on + strand, within AZOBR_RS03360at 712.452 kb on + strand, within AZOBR_RS03360at 712.492 kb on - strand, within AZOBR_RS03360at 712.500 kb on + strand, within AZOBR_RS03360at 712.500 kb on + strand, within AZOBR_RS03360at 712.500 kb on + strand, within AZOBR_RS03360at 712.500 kb on + strand, within AZOBR_RS03360at 712.500 kb on + strand, within AZOBR_RS03360at 712.501 kb on - strand, within AZOBR_RS03360at 712.501 kb on - strand, within AZOBR_RS03360at 712.501 kb on - strand, within AZOBR_RS03360at 712.501 kb on - strand, within AZOBR_RS03360at 712.633 kb on - strand, within AZOBR_RS03360at 712.692 kb on + strand, within AZOBR_RS03360at 712.785 kb on + strand, within AZOBR_RS03360at 712.785 kb on + strand, within AZOBR_RS03360at 712.786 kb on - strand, within AZOBR_RS03360at 712.786 kb on - strand, within AZOBR_RS03360at 712.786 kb on - strand, within AZOBR_RS03360at 712.786 kb on - strand, within AZOBR_RS03360at 712.786 kb on - strand, within AZOBR_RS03360at 712.786 kb on - strand, within AZOBR_RS03360at 712.827 kb on + strandat 712.827 kb on + strandat 712.827 kb on + strandat 712.827 kb on + strandat 712.827 kb on + strandat 712.828 kb on - strandat 712.876 kb on - strandat 713.463 kb on - strand, within AZOBR_RS03365

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
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710,827 - -0.8
710,827 - +0.6
710,928 + +0.1
710,929 - +0.6
710,929 - -0.4
710,968 - +1.3
711,238 - +0.2
711,417 + +0.5
711,417 + -1.0
711,418 - +0.4
711,418 - -0.6
711,450 + +0.6
711,450 + -0.1
711,450 + -0.3
711,451 - -1.5
711,532 - +1.7
711,532 - -0.2
712,266 + AZOBR_RS03360 0.42 -0.2
712,407 + AZOBR_RS03360 0.54 -0.8
712,452 + AZOBR_RS03360 0.58 -0.9
712,492 - AZOBR_RS03360 0.62 -1.0
712,500 + AZOBR_RS03360 0.63 +0.1
712,500 + AZOBR_RS03360 0.63 -0.2
712,500 + AZOBR_RS03360 0.63 -0.2
712,500 + AZOBR_RS03360 0.63 +0.1
712,500 + AZOBR_RS03360 0.63 +0.6
712,501 - AZOBR_RS03360 0.63 -0.1
712,501 - AZOBR_RS03360 0.63 +0.2
712,501 - AZOBR_RS03360 0.63 +2.3
712,501 - AZOBR_RS03360 0.63 +1.0
712,633 - AZOBR_RS03360 0.74 -0.2
712,692 + AZOBR_RS03360 0.80 +0.8
712,785 + AZOBR_RS03360 0.88 -0.0
712,785 + AZOBR_RS03360 0.88 +0.7
712,786 - AZOBR_RS03360 0.88 +0.6
712,786 - AZOBR_RS03360 0.88 -0.2
712,786 - AZOBR_RS03360 0.88 +0.2
712,786 - AZOBR_RS03360 0.88 -1.1
712,786 - AZOBR_RS03360 0.88 +0.5
712,786 - AZOBR_RS03360 0.88 +0.4
712,827 + +0.5
712,827 + +0.7
712,827 + -0.8
712,827 + +0.4
712,827 + +0.4
712,828 - +0.4
712,876 - +0.3
713,463 - AZOBR_RS03365 0.43 +0.0

Or see this region's nucleotide sequence