Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20820

Experiment: Uridine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (C)
4,558,246	+				-0.9
4,558,635	+		AO353_20815	0.45	-1.6
4,558,636	-		AO353_20815	0.45	-1.7
4,558,676	+		AO353_20815	0.49	+0.7
4,558,676	+		AO353_20815	0.49	-1.4
4,558,677	-		AO353_20815	0.49	-1.5
4,558,677	-		AO353_20815	0.49	-1.6
4,558,834	+		AO353_20815	0.66	-0.6
4,558,860	+		AO353_20815	0.68	-1.0
4,559,023	-		AO353_20815	0.85	-2.7
4,559,159	+				+1.2
4,559,159	+				-0.1
4,559,159	+				-0.1
4,559,160	-				-1.6
4,559,160	-				-1.6
4,559,160	-				-2.1
4,559,174	+				+1.3
4,559,218	+				-2.3
4,559,218	+				-2.3
4,559,219	-				-2.6
4,559,219	-				-2.8
4,559,273	+				-2.6
4,559,273	+				-2.4
4,559,273	+				-1.6
4,559,273	+				+0.2
4,559,273	+				-1.7
4,559,273	+				-0.1
4,559,273	+				-1.7
4,559,274	-				-2.9
4,559,274	-				-4.3
4,559,715	+		AO353_20820	0.32	-2.4
4,559,715	+				-1.3
4,559,715	+		AO353_20820	0.32	-1.9
4,559,715	+		AO353_20820	0.32	-0.4
4,559,715	+		AO353_20820	0.32	-3.1
4,559,715	+		AO353_20820	0.32	+1.1
4,559,715	+		AO353_20820	0.32	-3.1
4,559,716	-		AO353_20820	0.32	-0.3
4,559,716	-		AO353_20820	0.32	-2.9
4,559,716	-		AO353_20820	0.32	-1.3
4,559,716	-		AO353_20820	0.32	-1.9
4,559,716	-		AO353_20820	0.32	-2.1
4,559,716	-		AO353_20820	0.32	-1.7
4,559,716	-		AO353_20820	0.32	-2.5
4,559,716	-		AO353_20820	0.32	-1.4
4,559,716	-				-0.9
4,559,816	+		AO353_20820	0.38	-2.0
4,559,817	-		AO353_20820	0.38	-3.3
4,559,817	-		AO353_20820	0.38	+0.2
4,559,817	-		AO353_20820	0.38	-2.5
4,559,817	-				+0.1
4,559,817	-		AO353_20820	0.38	-2.4
4,559,817	-		AO353_20820	0.38	-0.9
4,559,817	-		AO353_20820	0.38	-2.6
4,559,817	-		AO353_20820	0.38	+0.1
4,559,818	+		AO353_20820	0.39	-1.4
4,559,818	+		AO353_20820	0.39	-1.9
4,559,819	-		AO353_20820	0.39	-2.1
4,559,819	-		AO353_20820	0.39	-0.9
4,559,912	+		AO353_20820	0.45	-1.7
4,559,912	+		AO353_20820	0.45	-1.1
4,559,912	+		AO353_20820	0.45	-2.4
4,559,912	+		AO353_20820	0.45	-1.0
4,559,912	+		AO353_20820	0.45	-0.9
4,559,913	-		AO353_20820	0.45	-1.7
4,559,913	-		AO353_20820	0.45	-1.3
4,559,913	-		AO353_20820	0.45	-2.1
4,559,913	-		AO353_20820	0.45	-3.2
4,559,913	-		AO353_20820	0.45	-2.0
4,559,913	-		AO353_20820	0.45	-2.7
4,560,264	+		AO353_20820	0.67	-1.4
4,560,264	+		AO353_20820	0.67	-0.4
4,560,265	-		AO353_20820	0.67	-0.1
4,560,265	-		AO353_20820	0.67	-1.3
4,560,304	+		AO353_20820	0.70	-1.3
4,560,304	+		AO353_20820	0.70	-3.6
4,560,304	+		AO353_20820	0.70	-1.6
4,560,304	+		AO353_20820	0.70	-3.2
4,560,305	-		AO353_20820	0.70	-2.6
4,560,305	-		AO353_20820	0.70	-2.7
4,560,539	+		AO353_20820	0.85	-1.8
4,560,539	+		AO353_20820	0.85	-0.1
4,560,539	+		AO353_20820	0.85	-0.5
4,560,540	-		AO353_20820	0.85	-2.9
4,560,540	-		AO353_20820	0.85	-2.0
4,560,540	-		AO353_20820	0.85	-0.8
4,560,628	+				-2.8
4,560,629	-				-0.6
4,560,773	+				-0.6
4,560,773	+				-1.0
4,560,773	+				-3.4
4,560,774	-				-2.2
4,560,774	-				-2.5
4,560,798	+				-2.5
4,560,798	+				-2.0
4,560,798	+				-3.1
4,560,798	+				-3.5
4,560,798	+				-1.4
4,560,798	+				-3.6
4,560,798	+				-1.2
4,560,798	+				+1.3
4,560,799	-				-0.9
4,560,799	-				-1.8
4,560,799	-				+2.3
4,560,799	-				-1.9
4,560,799	-				-0.9
4,560,799	-				-0.6
4,560,801	+				-1.6
4,560,801	+				+0.3
4,560,801	+				-1.8
4,560,801	+				-1.9
4,560,802	-				-1.1
4,560,802	-				-3.9
4,560,826	+				-0.3
4,560,826	+				-1.7
4,560,826	+				-2.4
4,560,826	+				-2.4
4,560,826	+				-2.3
4,560,826	+				-2.5
4,560,826	+				-1.4
4,560,826	+				-2.9
4,560,826	+				-2.2
4,560,827	-				-4.5
4,560,827	-				-1.1
4,560,827	-				-2.3
4,560,827	-				-2.0
4,560,898	+		AO353_20825	0.13	-1.3
4,560,898	+		AO353_20825	0.13	-2.4
4,560,898	+		AO353_20825	0.13	-3.4
4,560,898	+		AO353_20825	0.13	-2.6
4,560,899	-		AO353_20825	0.13	-1.7
4,560,899	-		AO353_20825	0.13	-2.5
4,560,899	-		AO353_20825	0.13	-2.9
4,560,899	-		AO353_20825	0.13	-1.0
4,560,899	-		AO353_20825	0.13	-2.3
4,560,899	-		AO353_20825	0.13	-1.9
4,560,899	-		AO353_20825	0.13	-0.9
4,560,899	-		AO353_20825	0.13	-1.9
4,561,225	+		AO353_20825	0.47	-1.4
4,561,225	+		AO353_20825	0.47	-0.1
4,561,225	+		AO353_20825	0.47	+0.1
4,561,225	+				+1.1
4,561,225	+		AO353_20825	0.47	-0.9
4,561,225	+		AO353_20825	0.47	-2.3
4,561,225	+		AO353_20825	0.47	-0.5
4,561,226	-		AO353_20825	0.47	-2.3
4,561,226	-		AO353_20825	0.47	-1.9
4,561,226	-		AO353_20825	0.47	-2.4
4,561,226	-		AO353_20825	0.47	-1.6
4,561,226	-		AO353_20825	0.47	-2.0
4,561,226	-		AO353_20825	0.47	-2.1
4,561,226	-		AO353_20825	0.47	-2.2
4,561,272	+		AO353_20825	0.51	-2.6
4,561,272	+		AO353_20825	0.51	-1.9
4,561,273	-		AO353_20825	0.52	-3.8
4,561,273	-		AO353_20825	0.52	-3.2
4,561,305	+		AO353_20825	0.55	-2.7
4,561,306	-		AO353_20825	0.55	-0.6
4,561,415	-		AO353_20825	0.66	-3.5
4,561,523	+		AO353_20825	0.77	-2.2
4,561,523	+		AO353_20825	0.77	-1.4
4,561,524	-		AO353_20825	0.77	+0.7
4,561,524	-		AO353_20825	0.77	-3.4
4,561,714	+				-0.6
4,561,715	-				-2.4
4,561,715	-				-1.9
4,561,769	+				-1.8
4,561,769	+				-0.7
4,561,769	+				-2.4
4,561,769	+				-1.0
4,561,769	+				-0.9
4,561,769	+				-2.4
4,561,769	+				+0.7
4,561,769	+				-0.6
4,561,770	-				-2.7
4,561,770	-				-2.4
4,561,770	-				-3.9
4,561,770	-				-2.4
4,561,770	-				-1.9
4,561,770	-				-0.0
4,561,770	-				-3.5
4,561,770	-				-1.0
4,561,770	-				-2.5
4,561,770	-				-0.9