Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17625

Experiment: Uridine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (C)
3,884,310	+		AO353_17620	0.73	+1.5
3,884,310	+		AO353_17620	0.73	+3.1
3,884,311	-		AO353_17620	0.73	+0.3
3,884,311	-		AO353_17620	0.73	+1.2
3,884,311	-		AO353_17620	0.73	+0.1
3,884,311	-		AO353_17620	0.73	+1.6
3,884,311	-		AO353_17620	0.73	+0.2
3,884,311	-		AO353_17620	0.73	+1.1
3,884,349	+		AO353_17620	0.76	+2.5
3,884,349	+		AO353_17620	0.76	+0.6
3,884,349	+		AO353_17620	0.76	+1.1
3,884,350	-		AO353_17620	0.76	+1.2
3,884,441	-		AO353_17620	0.82	+0.3
3,884,491	-		AO353_17620	0.85	+0.9
3,884,606	+				+1.8
3,884,606	+				+1.0
3,884,607	-				+1.8
3,884,607	-				+0.5
3,884,607	-				-0.4
3,884,607	-				+0.3
3,884,823	+				+2.0
3,884,823	+				+0.3
3,884,823	+				+3.3
3,884,823	+				+1.9
3,884,824	-				-0.9
3,884,824	-				-2.4
3,884,824	-				-1.4
3,884,824	-				-2.9
3,884,824	-				-0.9
3,884,824	-				-1.6
3,884,824	-				-3.3
3,884,824	-				-0.8
3,884,824	-				-0.4
3,884,824	-				-1.6
3,884,824	-				-0.6
3,884,824	-				-0.6
3,884,824	-				+1.2
3,884,824	-				-1.0
3,884,824	-				-1.2
3,884,826	+				+0.3
3,884,826	+				-0.6
3,884,826	+				+1.1
3,884,826	+				+0.8
3,884,826	+				+1.1
3,884,826	+				+0.5
3,884,826	+				+0.1
3,884,826	+				+1.5
3,884,826	+				+0.7
3,884,826	+				+0.7
3,884,826	+				+0.5
3,884,826	+				+0.4
3,884,827	-				-0.7
3,884,827	-				-2.7
3,884,827	-				-1.4
3,884,827	-				-1.2
3,884,827	-				-1.2
3,884,827	-				-1.9
3,884,827	-				+1.0
3,884,827	-				-0.9
3,884,827	-				-0.2
3,884,827	-				+0.7
3,884,827	-				-0.2
3,884,827	-				-2.3
3,884,827	-				-0.6
3,884,828	+				-0.6
3,884,828	+				+0.6
3,884,828	+				+0.4
3,884,828	+				+1.3
3,884,828	+				+0.7
3,884,828	+				-0.0
3,884,828	+				+1.6
3,884,829	-				-1.3
3,884,829	-				-2.2
3,884,829	-				-1.4
3,884,829	-				-2.6
3,884,829	-				-1.0
3,884,829	-				-2.3
3,884,829	-				-1.3
3,884,830	+				+2.5
3,884,830	+				+0.6
3,884,830	+				+1.3
3,884,830	+				+1.3
3,884,831	-				-0.7
3,884,831	-				-2.5
3,884,831	-				-1.4
3,884,831	-				-2.7
3,884,831	-				+0.7
3,884,831	-				-0.4
3,884,852	-				-1.8
3,884,852	-				-2.1
3,884,861	+				-0.5
3,884,861	+				-0.7
3,884,862	-				-0.9
3,884,862	-				-1.2
3,884,862	-				+2.3
3,884,862	-				-0.5
3,884,879	+				+1.2
3,884,879	+				+2.8
3,884,880	-				-1.2
3,884,880	-				+0.1
3,884,880	-				-0.2
3,884,896	+				+0.6
3,884,897	-				-0.4
3,884,919	-				-1.0
3,884,919	-				-1.4
3,884,985	-				-0.1
3,884,990	-				+0.3
3,885,008	+				+0.2
3,885,044	+				+1.8
3,885,044	+				+2.1
3,885,045	-				-1.0
3,885,045	-				-1.2
3,885,045	-				+2.0
3,885,045	-				-1.4
3,885,045	-				-0.4
3,885,235	+				+1.0
3,885,235	+				-0.7
3,885,236	-				-1.2
3,885,236	-				+0.8
3,885,236	-				-1.9
3,885,257	+				-0.7
3,885,257	+				-1.0
3,885,258	-				-1.0
3,885,258	-				-1.8
3,885,261	+				+0.6
3,885,262	-				+0.6
3,885,262	-				+1.4
3,885,262	-				-2.0
3,885,262	-				+1.3
3,885,262	-				-1.9
3,885,262	-				-1.3
3,885,301	+				+0.5
3,885,370	+		AO353_17625	0.13	-1.7
3,885,370	+		AO353_17625	0.13	-2.4
3,885,370	+		AO353_17625	0.13	-1.7
3,885,370	+		AO353_17625	0.13	+0.4
3,885,371	-		AO353_17625	0.13	-1.5
3,885,371	-		AO353_17625	0.13	+0.7
3,885,371	-		AO353_17625	0.13	-0.0
3,885,371	-		AO353_17625	0.13	-0.5
3,885,381	+		AO353_17625	0.14	-0.1
3,885,381	+		AO353_17625	0.14	-2.2
3,885,381	+		AO353_17625	0.14	-0.6
3,885,381	+		AO353_17625	0.14	-0.4
3,885,382	-		AO353_17625	0.15	+0.2
3,885,382	-				-0.6
3,885,382	-		AO353_17625	0.15	-1.2
3,885,471	+		AO353_17625	0.30	-0.8
3,885,510	+		AO353_17625	0.37	-1.6
3,885,510	+		AO353_17625	0.37	+0.1
3,885,510	+		AO353_17625	0.37	-2.6
3,885,510	+		AO353_17625	0.37	-0.1
3,885,511	-		AO353_17625	0.37	-2.0
3,885,512	+		AO353_17625	0.37	-2.7
3,885,512	+		AO353_17625	0.37	-2.7
3,885,513	-		AO353_17625	0.37	+0.8
3,885,552	+		AO353_17625	0.44	-0.8
3,885,552	+		AO353_17625	0.44	-2.2
3,885,552	+		AO353_17625	0.44	+0.1
3,885,553	-		AO353_17625	0.44	+1.1
3,885,553	-		AO353_17625	0.44	-2.4
3,885,615	+		AO353_17625	0.55	+0.2
3,885,615	+		AO353_17625	0.55	-0.8
3,885,615	+		AO353_17625	0.55	-0.4
3,885,615	+		AO353_17625	0.55	-1.9
3,885,616	-		AO353_17625	0.55	-0.8
3,885,616	-		AO353_17625	0.55	-1.7
3,885,616	-		AO353_17625	0.55	+0.4
3,885,616	-		AO353_17625	0.55	-1.5
3,885,616	-		AO353_17625	0.55	-0.6
3,885,616	-		AO353_17625	0.55	+0.2
3,885,724	+		AO353_17625	0.73	-1.2
3,885,724	+		AO353_17625	0.73	-0.0
3,885,724	+		AO353_17625	0.73	-1.5
3,885,728	+		AO353_17625	0.74	+0.4
3,885,728	+		AO353_17625	0.74	-2.0
3,885,729	-		AO353_17625	0.74	-0.2
3,885,737	-		AO353_17625	0.76	+1.7
3,885,742	+		AO353_17625	0.76	-2.9
3,885,766	-		AO353_17625	0.81	-2.3
3,885,804	-		AO353_17625	0.87	-0.4
3,886,222	+		AO353_17630	0.53	+1.0
3,886,222	+		AO353_17630	0.53	-0.0
3,886,466	-				+1.1
3,886,466	-				+3.2
3,886,466	-				-0.0
3,886,466	-				+0.7
3,886,466	-				-0.9
3,886,522	+				+2.1
3,886,523	-				+1.6
3,886,523	-				+0.7
3,886,523	-				+1.4
3,886,526	+				-0.3
3,886,526	+				+1.0
3,886,526	+				+1.4
3,886,526	+				+0.4
3,886,526	+				+1.6
3,886,526	+				+0.3
3,886,526	+				+0.3
3,886,527	-				+0.4
3,886,527	-				+0.0
3,886,564	-				+0.2
3,886,564	-				+0.8
3,886,649	+		AO353_17635	0.15	+1.8
3,886,650	-		AO353_17635	0.15	+0.5
3,886,650	-		AO353_17635	0.15	+1.2
3,886,655	+		AO353_17635	0.16	+0.8
3,886,656	-		AO353_17635	0.16	+1.3
3,886,714	+		AO353_17635	0.22	+0.3
3,886,714	+		AO353_17635	0.22	+1.6
3,886,715	-		AO353_17635	0.22	+2.2
3,886,747	+		AO353_17635	0.25	+1.0
3,886,763	+		AO353_17635	0.27	+1.9
3,886,763	+		AO353_17635	0.27	+0.8
3,886,763	+		AO353_17635	0.27	+1.4
3,886,764	-		AO353_17635	0.27	-0.0
3,886,764	-		AO353_17635	0.27	-0.0
3,886,805	+		AO353_17635	0.31	+1.0
3,886,805	+		AO353_17635	0.31	+1.1
3,886,806	-		AO353_17635	0.31	+1.0
3,886,858	-		AO353_17635	0.37	-1.4
3,886,858	-		AO353_17635	0.37	+1.4
3,886,858	-		AO353_17635	0.37	-0.0