Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10225

Experiment: Uridine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (C)
2,237,441	-		AO353_10220	0.21	-1.4
2,237,451	+		AO353_10220	0.21	+0.4
2,237,451	+		AO353_10220	0.21	+0.4
2,237,451	+		AO353_10220	0.21	+0.3
2,237,451	+		AO353_10220	0.21	-0.7
2,237,452	-		AO353_10220	0.21	+0.1
2,237,452	-		AO353_10220	0.21	+0.2
2,237,452	-		AO353_10220	0.21	-0.1
2,237,452	-		AO353_10220	0.21	+0.2
2,237,452	-		AO353_10220	0.21	+0.1
2,237,452	-		AO353_10220	0.21	+1.5
2,237,517	+		AO353_10220	0.27	-0.1
2,237,517	+		AO353_10220	0.27	-0.4
2,237,517	+		AO353_10220	0.27	-1.6
2,237,517	+		AO353_10220	0.27	+1.6
2,237,518	-		AO353_10220	0.27	-0.7
2,237,518	-		AO353_10220	0.27	+0.5
2,237,518	-		AO353_10220	0.27	-0.5
2,237,518	-		AO353_10220	0.27	+2.3
2,237,518	-		AO353_10220	0.27	+0.4
2,237,518	-		AO353_10220	0.27	+0.7
2,237,518	-		AO353_10220	0.27	-1.1
2,237,518	-		AO353_10220	0.27	-0.0
2,237,518	-		AO353_10220	0.27	+0.6
2,237,529	+		AO353_10220	0.28	-0.9
2,237,529	+		AO353_10220	0.28	+2.1
2,237,529	+		AO353_10220	0.28	-1.9
2,237,529	+		AO353_10220	0.28	+0.5
2,237,529	+		AO353_10220	0.28	-0.7
2,237,530	-		AO353_10220	0.28	+0.1
2,237,530	-		AO353_10220	0.28	-2.4
2,237,530	-		AO353_10220	0.28	-1.1
2,237,530	-		AO353_10220	0.28	-1.7
2,237,530	-		AO353_10220	0.28	+0.3
2,237,530	-		AO353_10220	0.28	-1.6
2,237,530	-		AO353_10220	0.28	-0.8
2,237,530	-		AO353_10220	0.28	-0.6
2,237,579	-		AO353_10220	0.32	-0.3
2,237,583	+		AO353_10220	0.33	+0.4
2,237,584	-		AO353_10220	0.33	+1.6
2,237,584	-		AO353_10220	0.33	-0.6
2,237,584	-		AO353_10220	0.33	-0.0
2,237,584	-		AO353_10220	0.33	-0.0
2,237,697	+		AO353_10220	0.43	-2.1
2,237,698	-		AO353_10220	0.43	+0.2
2,237,698	-		AO353_10220	0.43	+0.4
2,237,868	+		AO353_10220	0.57	-1.0
2,237,868	+		AO353_10220	0.57	-0.3
2,237,868	+		AO353_10220	0.57	-0.9
2,237,868	+		AO353_10220	0.57	-0.0
2,237,868	+		AO353_10220	0.57	-0.4
2,237,868	+		AO353_10220	0.57	-0.8
2,237,868	+		AO353_10220	0.57	-0.5
2,237,869	-		AO353_10220	0.58	-0.5
2,237,869	-		AO353_10220	0.58	-0.4
2,237,869	-		AO353_10220	0.58	-0.5
2,237,869	-		AO353_10220	0.58	-0.0
2,237,869	-		AO353_10220	0.58	-0.3
2,237,899	-		AO353_10220	0.60	-0.3
2,237,916	+		AO353_10220	0.62	-1.4
2,237,917	-		AO353_10220	0.62	+0.6
2,237,917	-		AO353_10220	0.62	+0.6
2,237,922	+		AO353_10220	0.62	+0.9
2,237,923	-		AO353_10220	0.62	+1.2
2,237,928	+		AO353_10220	0.63	-0.8
2,237,928	+		AO353_10220	0.63	+0.4
2,237,928	+		AO353_10220	0.63	-0.8
2,237,928	+		AO353_10220	0.63	-1.6
2,237,928	+		AO353_10220	0.63	-0.8
2,237,928	+		AO353_10220	0.63	+0.6
2,237,928	+		AO353_10220	0.63	+0.9
2,237,928	+		AO353_10220	0.63	+0.3
2,237,928	+		AO353_10220	0.63	-1.9
2,237,928	+		AO353_10220	0.63	-0.5
2,237,928	+		AO353_10220	0.63	-2.1
2,237,929	-		AO353_10220	0.63	-0.4
2,237,929	-		AO353_10220	0.63	+0.8
2,237,929	-		AO353_10220	0.63	+1.4
2,237,929	-		AO353_10220	0.63	-1.1
2,237,929	-		AO353_10220	0.63	+0.2
2,237,929	-		AO353_10220	0.63	+0.6
2,237,929	-		AO353_10220	0.63	+0.3
2,237,929	-		AO353_10220	0.63	-1.0
2,237,929	-		AO353_10220	0.63	-3.4
2,237,958	+		AO353_10220	0.65	-1.6
2,237,958	+		AO353_10220	0.65	-0.7
2,237,958	+		AO353_10220	0.65	+0.2
2,237,958	+		AO353_10220	0.65	-0.8
2,237,959	-		AO353_10220	0.65	-0.4
2,237,959	-		AO353_10220	0.65	-1.6
2,237,959	-		AO353_10220	0.65	-1.7
2,238,032	+		AO353_10220	0.72	-0.8
2,238,032	+		AO353_10220	0.72	+0.6
2,238,033	-		AO353_10220	0.72	-2.0
2,238,033	-		AO353_10220	0.72	-1.6
2,238,033	-		AO353_10220	0.72	-1.1
2,238,033	-		AO353_10220	0.72	+0.9
2,238,033	-		AO353_10220	0.72	-1.4
2,238,033	-		AO353_10220	0.72	-0.4
2,238,110	-		AO353_10220	0.78	+0.9
2,238,127	-		AO353_10220	0.80	+0.9
2,238,127	-		AO353_10220	0.80	-0.9
2,238,127	-		AO353_10220	0.80	-1.2
2,238,162	-		AO353_10220	0.83	+0.4
2,238,162	-		AO353_10220	0.83	-0.1
2,238,232	-		AO353_10220	0.89	-0.5
2,238,309	-				+0.6
2,238,326	+				+1.0
2,238,326	+				+0.3
2,238,326	+				+1.3
2,238,327	-				+0.6
2,238,327	-				+0.9
2,238,327	-				+0.5
2,238,327	-				+1.3
2,238,519	-		AO353_10225	0.18	-1.1
2,238,684	+		AO353_10225	0.37	-1.2
2,238,754	+		AO353_10225	0.45	-1.5
2,238,755	-		AO353_10225	0.45	-0.2
2,238,779	+		AO353_10225	0.48	-1.9
2,238,779	+		AO353_10225	0.48	-1.3
2,238,779	+		AO353_10225	0.48	-1.1
2,238,779	+		AO353_10225	0.48	-0.9
2,238,779	+		AO353_10225	0.48	-2.1
2,238,779	+		AO353_10225	0.48	-2.1
2,238,779	+		AO353_10225	0.48	+0.0
2,238,780	-		AO353_10225	0.48	+0.1
2,238,780	-		AO353_10225	0.48	-1.6
2,238,780	-		AO353_10225	0.48	-0.0
2,238,780	-		AO353_10225	0.48	-0.4
2,238,780	-		AO353_10225	0.48	+0.7
2,238,780	-		AO353_10225	0.48	-1.5
2,238,780	-		AO353_10225	0.48	+0.1
2,238,780	-		AO353_10225	0.48	-2.6
2,238,780	-		AO353_10225	0.48	-0.7
2,238,780	-		AO353_10225	0.48	-0.7
2,238,780	-		AO353_10225	0.48	-0.6
2,238,780	-		AO353_10225	0.48	-1.0
2,239,135	+		AO353_10225	0.88	-0.5
2,239,135	+		AO353_10225	0.88	+0.7
2,239,136	-		AO353_10225	0.88	+0.1
2,239,136	-		AO353_10225	0.88	+0.1
2,239,408	+		AO353_10230	0.13	+0.0
2,239,408	+		AO353_10230	0.13	+0.3
2,239,408	+		AO353_10230	0.13	-0.6
2,239,409	-		AO353_10230	0.13	+0.7
2,239,409	-		AO353_10230	0.13	+0.2
2,239,409	-		AO353_10230	0.13	+0.3
2,239,409	-		AO353_10230	0.13	-2.1
2,239,413	-		AO353_10230	0.13	-0.2
2,239,453	+		AO353_10230	0.16	+0.4
2,239,453	+		AO353_10230	0.16	-0.6
2,239,453	+		AO353_10230	0.16	+0.4
2,239,453	+		AO353_10230	0.16	-1.2
2,239,453	+		AO353_10230	0.16	-0.7
2,239,453	+		AO353_10230	0.16	+1.4
2,239,453	+		AO353_10230	0.16	+0.3
2,239,453	+		AO353_10230	0.16	+0.6
2,239,514	+		AO353_10230	0.21	-0.6
2,239,546	+		AO353_10230	0.24	+0.3
2,239,633	+		AO353_10230	0.30	-0.0
2,239,633	+		AO353_10230	0.30	+0.2
2,239,633	+		AO353_10230	0.30	+0.8
2,239,634	-		AO353_10230	0.30	-0.1
2,239,634	-		AO353_10230	0.30	+0.1
2,239,634	-		AO353_10230	0.30	-0.1
2,239,634	-		AO353_10230	0.30	-0.2
2,239,634	-		AO353_10230	0.30	-0.8
2,239,634	-		AO353_10230	0.30	-0.4
2,239,651	+		AO353_10230	0.32	+0.3
2,239,651	+		AO353_10230	0.32	+0.2
2,239,651	+		AO353_10230	0.32	-1.3
2,239,651	+		AO353_10230	0.32	-0.9
2,239,651	+		AO353_10230	0.32	-0.3
2,239,651	+		AO353_10230	0.32	-0.4
2,239,651	+		AO353_10230	0.32	+0.5
2,239,651	+		AO353_10230	0.32	-1.8
2,239,651	+		AO353_10230	0.32	-2.4
2,239,651	+		AO353_10230	0.32	-0.7
2,239,652	-		AO353_10230	0.32	+0.7
2,239,652	-		AO353_10230	0.32	-0.5
2,239,652	-		AO353_10230	0.32	+0.1
2,239,652	-		AO353_10230	0.32	-0.9
2,239,652	-		AO353_10230	0.32	-0.3
2,239,652	-		AO353_10230	0.32	+0.5
2,239,652	-		AO353_10230	0.32	-2.5
2,239,652	-		AO353_10230	0.32	-1.0
2,239,652	-		AO353_10230	0.32	-1.8
2,239,652	-		AO353_10230	0.32	-0.8
2,239,652	-		AO353_10230	0.32	+0.2
2,239,652	-		AO353_10230	0.32	-0.4
2,239,652	-		AO353_10230	0.32	-1.0
2,239,652	-		AO353_10230	0.32	-1.0
2,239,652	-		AO353_10230	0.32	-1.3
2,239,652	-		AO353_10230	0.32	+0.0
2,239,652	-		AO353_10230	0.32	-0.1
2,239,652	-		AO353_10230	0.32	+0.3
2,239,652	-		AO353_10230	0.32	+0.2
2,239,652	-		AO353_10230	0.32	-1.6
2,239,652	-		AO353_10230	0.32	+2.0
2,239,652	-		AO353_10230	0.32	+0.4
2,239,679	-		AO353_10230	0.34	-0.6
2,239,679	-		AO353_10230	0.34	-0.4
2,239,696	+		AO353_10230	0.35	+0.8
2,239,697	-		AO353_10230	0.35	+1.3
2,239,700	+		AO353_10230	0.35	-1.8
2,239,702	+		AO353_10230	0.35	+1.3
2,239,702	+		AO353_10230	0.35	+1.0
2,239,702	+		AO353_10230	0.35	+1.3
2,239,703	-		AO353_10230	0.36	-0.8
2,239,703	-		AO353_10230	0.36	-0.9
2,239,703	-		AO353_10230	0.36	-1.4
2,239,703	-		AO353_10230	0.36	-0.2
2,239,703	-		AO353_10230	0.36	-0.5
2,239,703	-		AO353_10230	0.36	+0.7
2,239,703	-		AO353_10230	0.36	-0.1
2,239,703	-		AO353_10230	0.36	-0.1
2,239,726	+		AO353_10230	0.37	-0.4
2,239,727	-		AO353_10230	0.37	+0.1
2,239,741	+		AO353_10230	0.38	+1.8
2,239,741	+		AO353_10230	0.38	+0.7
2,239,741	+		AO353_10230	0.38	-0.4
2,239,742	-		AO353_10230	0.39	-1.1
2,239,742	-		AO353_10230	0.39	-2.9
2,239,742	-		AO353_10230	0.39	+0.4
2,239,900	+		AO353_10230	0.51	+0.8
2,239,900	+		AO353_10230	0.51	+0.6
2,239,900	+		AO353_10230	0.51	+0.8
2,239,900	+		AO353_10230	0.51	-1.5
2,239,900	+		AO353_10230	0.51	-0.3
2,239,900	+		AO353_10230	0.51	+0.1
2,239,900	+		AO353_10230	0.51	+0.6
2,239,900	+		AO353_10230	0.51	-1.2
2,239,900	+		AO353_10230	0.51	-1.0
2,239,901	-		AO353_10230	0.51	-0.6
2,239,901	-		AO353_10230	0.51	+1.8
2,239,901	-		AO353_10230	0.51	-0.4
2,239,901	-		AO353_10230	0.51	+0.3
2,239,901	-		AO353_10230	0.51	-1.3
2,239,901	-		AO353_10230	0.51	-2.1
2,239,901	-		AO353_10230	0.51	+1.8
2,239,901	-		AO353_10230	0.51	+0.1
2,239,920	+		AO353_10230	0.52	-0.9
2,239,920	+		AO353_10230	0.52	-0.0
2,239,920	+		AO353_10230	0.52	-1.6
2,239,921	-		AO353_10230	0.52	+2.0
2,239,921	-		AO353_10230	0.52	+0.3
2,239,921	-		AO353_10230	0.52	-0.2
2,239,956	-		AO353_10230	0.55	-0.9
2,240,070	+		AO353_10230	0.64	+1.2
2,240,070	+		AO353_10230	0.64	+0.2
2,240,070	+		AO353_10230	0.64	-0.4
2,240,071	-		AO353_10230	0.64	-1.5
2,240,071	-		AO353_10230	0.64	-0.2
2,240,071	-		AO353_10230	0.64	+2.3
2,240,071	-		AO353_10230	0.64	-1.0
2,240,071	-		AO353_10230	0.64	-1.5
2,240,170	+		AO353_10230	0.71	+0.4
2,240,170	+		AO353_10230	0.71	-0.1
2,240,170	+		AO353_10230	0.71	-1.9
2,240,170	+		AO353_10230	0.71	+1.4
2,240,171	-		AO353_10230	0.71	-2.3
2,240,171	-		AO353_10230	0.71	-1.2
2,240,171	-		AO353_10230	0.71	-1.8
2,240,208	+		AO353_10230	0.74	+0.1
2,240,208	+		AO353_10230	0.74	-0.6
2,240,208	+		AO353_10230	0.74	+1.0
2,240,209	-		AO353_10230	0.74	-0.4