Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3532 and Dsui_3533 overlap by 1 nucleotides Dsui_3533 and Dsui_3534 are separated by 97 nucleotides Dsui_3534 and Dsui_3535 overlap by 4 nucleotides
Dsui_3532: Dsui_3532 - Protein of unknown function (DUF3106), at 3,797,938 to 3,798,663
_3532
Dsui_3533: Dsui_3533 - putative membrane protein/domain protein, at 3,798,663 to 3,799,142
_3533
Dsui_3534: Dsui_3534 - putative permease, at 3,799,240 to 3,800,346
_3534
Dsui_3535: Dsui_3535 - putative permease, at 3,800,343 to 3,801,428
_3535
Position (kb)
3799
3800
3801 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3798.249 kb on + strand, within Dsui_3532 at 3798.366 kb on + strand, within Dsui_3532 at 3798.374 kb on - strand, within Dsui_3532 at 3798.478 kb on - strand, within Dsui_3532 at 3798.532 kb on + strand, within Dsui_3532 at 3798.569 kb on - strand, within Dsui_3532 at 3798.684 kb on + strand at 3798.715 kb on + strand, within Dsui_3533 at 3798.750 kb on + strand, within Dsui_3533 at 3798.856 kb on + strand, within Dsui_3533 at 3798.927 kb on + strand, within Dsui_3533 at 3798.928 kb on + strand, within Dsui_3533 at 3799.017 kb on + strand, within Dsui_3533 at 3799.017 kb on + strand, within Dsui_3533 at 3799.061 kb on - strand, within Dsui_3533 at 3799.066 kb on - strand, within Dsui_3533
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 3,798,249 + Dsui_3532 0.43 -0.2 3,798,366 + Dsui_3532 0.59 -1.2 3,798,374 - Dsui_3532 0.60 -1.1 3,798,478 - Dsui_3532 0.74 -3.1 3,798,532 + Dsui_3532 0.82 -0.7 3,798,569 - Dsui_3532 0.87 -1.1 3,798,684 + -0.5 3,798,715 + Dsui_3533 0.11 -0.7 3,798,750 + Dsui_3533 0.18 -0.5 3,798,856 + Dsui_3533 0.40 -0.3 3,798,927 + Dsui_3533 0.55 -0.8 3,798,928 + Dsui_3533 0.55 -0.8 3,799,017 + Dsui_3533 0.74 -0.5 3,799,017 + Dsui_3533 0.74 +0.1 3,799,061 - Dsui_3533 0.83 -2.8 3,799,066 - Dsui_3533 0.84 -1.3
Or see this region's nucleotide sequence