Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3439 and Dsui_3440 are separated by 127 nucleotides Dsui_3440 and Dsui_3441 overlap by 4 nucleotides
Dsui_3439: Dsui_3439 - methyl-accepting chemotaxis protein, at 3,694,316 to 3,695,965
_3439
Dsui_3440: Dsui_3440 - Protein of unknown function (DUF2892), at 3,696,093 to 3,696,302
_3440
Dsui_3441: Dsui_3441 - cation/multidrug efflux pump, at 3,696,299 to 3,699,550
_3441
Position (kb)
3696
3697 Strain fitness (log2 ratio)
-2
-1
0
1 at 3695.094 kb on - strand, within Dsui_3439 at 3695.119 kb on + strand at 3695.160 kb on - strand, within Dsui_3439 at 3695.221 kb on + strand, within Dsui_3439 at 3695.233 kb on + strand, within Dsui_3439 at 3695.325 kb on - strand, within Dsui_3439 at 3695.611 kb on + strand, within Dsui_3439 at 3695.660 kb on + strand, within Dsui_3439 at 3695.683 kb on - strand, within Dsui_3439 at 3695.684 kb on - strand, within Dsui_3439 at 3695.730 kb on + strand, within Dsui_3439 at 3695.820 kb on - strand at 3695.925 kb on + strand at 3696.036 kb on - strand at 3696.115 kb on + strand at 3696.167 kb on - strand, within Dsui_3440 at 3696.255 kb on - strand, within Dsui_3440 at 3696.298 kb on - strand at 3696.313 kb on + strand at 3696.529 kb on - strand at 3696.559 kb on + strand at 3696.612 kb on - strand at 3696.679 kb on + strand at 3696.716 kb on - strand, within Dsui_3441 at 3696.751 kb on - strand, within Dsui_3441 at 3696.839 kb on - strand, within Dsui_3441 at 3696.885 kb on + strand, within Dsui_3441 at 3696.988 kb on - strand at 3697.092 kb on - strand, within Dsui_3441
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 3,695,094 - Dsui_3439 0.47 -1.3 3,695,119 + -0.5 3,695,160 - Dsui_3439 0.51 -0.1 3,695,221 + Dsui_3439 0.55 -0.5 3,695,233 + Dsui_3439 0.56 +0.5 3,695,325 - Dsui_3439 0.61 -1.4 3,695,611 + Dsui_3439 0.78 -0.5 3,695,660 + Dsui_3439 0.81 -1.5 3,695,683 - Dsui_3439 0.83 +0.3 3,695,684 - Dsui_3439 0.83 -1.2 3,695,730 + Dsui_3439 0.86 +0.5 3,695,820 - -0.4 3,695,925 + -0.5 3,696,036 - +0.5 3,696,115 + +0.5 3,696,167 - Dsui_3440 0.35 +0.5 3,696,255 - Dsui_3440 0.77 -2.3 3,696,298 - +0.5 3,696,313 + +0.5 3,696,529 - -1.1 3,696,559 + -0.5 3,696,612 - +0.5 3,696,679 + +0.5 3,696,716 - Dsui_3441 0.13 -1.5 3,696,751 - Dsui_3441 0.14 +0.5 3,696,839 - Dsui_3441 0.17 +0.5 3,696,885 + Dsui_3441 0.18 -1.8 3,696,988 - +0.5 3,697,092 - Dsui_3441 0.24 +0.5
Or see this region's nucleotide sequence