Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3347 and Dsui_3348 are separated by 54 nucleotides Dsui_3348 and Dsui_3349 overlap by 1 nucleotides Dsui_3349 and Dsui_3350 are separated by 232 nucleotides Dsui_3350 and Dsui_3351 are separated by 52 nucleotides
Dsui_3347: Dsui_3347 - acetyltransferase, N-acetylglutamate synthase, at 3,586,916 to 3,587,854
_3347
Dsui_3348: Dsui_3348 - Zn-finger containing NTP pyrophosphohydrolase, at 3,587,909 to 3,588,412
_3348
Dsui_3349: Dsui_3349 - hypothetical protein, at 3,588,412 to 3,588,723
_3349
Dsui_3350: Dsui_3350 - hypothetical protein, at 3,588,956 to 3,589,264
_3350
Dsui_3351: Dsui_3351 - cytochrome c peroxidase, at 3,589,317 to 3,590,636
_3351
Position (kb)
3588
3589 Strain fitness (log2 ratio)
-2
-1
0
1 at 3587.480 kb on + strand, within Dsui_3347 at 3587.480 kb on + strand, within Dsui_3347 at 3587.480 kb on + strand, within Dsui_3347 at 3587.488 kb on - strand, within Dsui_3347 at 3587.488 kb on - strand, within Dsui_3347 at 3587.586 kb on + strand at 3587.755 kb on + strand, within Dsui_3347 at 3587.857 kb on - strand at 3587.953 kb on - strand at 3588.098 kb on - strand, within Dsui_3348 at 3588.195 kb on + strand, within Dsui_3348 at 3588.428 kb on - strand at 3588.434 kb on - strand at 3588.434 kb on - strand at 3588.491 kb on - strand, within Dsui_3349 at 3588.493 kb on + strand, within Dsui_3349 at 3588.591 kb on - strand, within Dsui_3349 at 3588.603 kb on + strand, within Dsui_3349 at 3588.688 kb on - strand, within Dsui_3349 at 3588.699 kb on - strand at 3588.704 kb on - strand at 3588.946 kb on + strand at 3589.026 kb on - strand, within Dsui_3350 at 3589.054 kb on + strand at 3589.062 kb on - strand at 3589.110 kb on + strand, within Dsui_3350 at 3589.184 kb on + strand, within Dsui_3350 at 3589.192 kb on - strand, within Dsui_3350 at 3589.258 kb on + strand at 3589.275 kb on + strand at 3589.380 kb on + strand at 3589.425 kb on - strand at 3589.430 kb on - strand at 3589.479 kb on + strand, within Dsui_3351 at 3589.626 kb on + strand at 3589.695 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 3,587,480 + Dsui_3347 0.60 -0.5 3,587,480 + Dsui_3347 0.60 -2.1 3,587,480 + Dsui_3347 0.60 +0.5 3,587,488 - Dsui_3347 0.61 +0.5 3,587,488 - Dsui_3347 0.61 +0.5 3,587,586 + +0.5 3,587,755 + Dsui_3347 0.89 +0.5 3,587,857 - +0.5 3,587,953 - -1.5 3,588,098 - Dsui_3348 0.38 +0.5 3,588,195 + Dsui_3348 0.57 -1.1 3,588,428 - -0.5 3,588,434 - +0.5 3,588,434 - +0.7 3,588,491 - Dsui_3349 0.25 -2.7 3,588,493 + Dsui_3349 0.26 +0.5 3,588,591 - Dsui_3349 0.57 -1.5 3,588,603 + Dsui_3349 0.61 +0.5 3,588,688 - Dsui_3349 0.88 -1.1 3,588,699 - -1.1 3,588,704 - +1.5 3,588,946 + +0.5 3,589,026 - Dsui_3350 0.23 +0.5 3,589,054 + +0.5 3,589,062 - +0.5 3,589,110 + Dsui_3350 0.50 -0.5 3,589,184 + Dsui_3350 0.74 -1.1 3,589,192 - Dsui_3350 0.76 -1.9 3,589,258 + -1.9 3,589,275 + +0.5 3,589,380 + -1.9 3,589,425 - -0.5 3,589,430 - +0.5 3,589,479 + Dsui_3351 0.12 -1.9 3,589,626 + -0.5 3,589,695 + -0.5
Or see this region's nucleotide sequence