Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3170 and Dsui_3171 are separated by 579 nucleotides Dsui_3171 and Dsui_3172 are separated by 91 nucleotides
Dsui_3170: Dsui_3170 - PilZ domain-containing protein, at 3,399,380 to 3,400,111
_3170
Dsui_3171: Dsui_3171 - putative protein-disulfide isomerase, at 3,400,691 to 3,401,347
_3171
Dsui_3172: Dsui_3172 - Zn-dependent hydrolase, glyoxylase, at 3,401,439 to 3,402,341
_3172
Position (kb)
3400
3401
3402 Strain fitness (log2 ratio)
-2
-1
0
1 at 3399.729 kb on + strand, within Dsui_3170 at 3399.762 kb on - strand at 3399.887 kb on - strand, within Dsui_3170 at 3399.936 kb on - strand, within Dsui_3170 at 3399.972 kb on + strand, within Dsui_3170 at 3399.994 kb on - strand at 3400.043 kb on + strand at 3400.051 kb on - strand at 3400.151 kb on + strand at 3400.160 kb on - strand at 3400.235 kb on - strand at 3400.253 kb on + strand at 3400.253 kb on + strand at 3400.261 kb on - strand at 3400.261 kb on - strand at 3400.261 kb on - strand at 3400.316 kb on - strand at 3400.321 kb on + strand at 3400.373 kb on - strand at 3400.402 kb on + strand at 3400.406 kb on + strand at 3400.409 kb on - strand at 3400.409 kb on - strand at 3400.418 kb on + strand at 3400.418 kb on + strand at 3400.418 kb on + strand at 3400.419 kb on + strand at 3400.564 kb on - strand at 3400.575 kb on - strand at 3400.590 kb on - strand at 3400.645 kb on + strand at 3400.688 kb on + strand at 3400.696 kb on - strand at 3400.831 kb on - strand, within Dsui_3171 at 3400.879 kb on - strand, within Dsui_3171 at 3400.946 kb on - strand, within Dsui_3171 at 3401.021 kb on + strand at 3401.173 kb on - strand at 3401.179 kb on - strand, within Dsui_3171 at 3401.191 kb on + strand at 3401.332 kb on + strand at 3401.342 kb on + strand at 3401.478 kb on + strand at 3401.486 kb on - strand at 3401.558 kb on - strand at 3401.739 kb on - strand at 3401.798 kb on + strand at 3401.890 kb on - strand at 3401.989 kb on + strand, within Dsui_3172 at 3401.999 kb on + strand at 3402.000 kb on + strand at 3402.140 kb on - strand at 3402.140 kb on - strand at 3402.150 kb on - strand, within Dsui_3172 at 3402.157 kb on + strand at 3402.191 kb on + strand, within Dsui_3172 at 3402.219 kb on - strand at 3402.228 kb on - strand at 3402.236 kb on + strand at 3402.288 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 3,399,729 + Dsui_3170 0.48 +0.5 3,399,762 - +0.5 3,399,887 - Dsui_3170 0.69 +0.5 3,399,936 - Dsui_3170 0.76 +0.5 3,399,972 + Dsui_3170 0.81 +0.5 3,399,994 - +0.5 3,400,043 + +0.9 3,400,051 - +0.5 3,400,151 + -2.1 3,400,160 - +0.5 3,400,235 - +0.5 3,400,253 + -1.1 3,400,253 + -0.5 3,400,261 - -0.5 3,400,261 - +0.5 3,400,261 - +0.5 3,400,316 - -1.8 3,400,321 + -1.5 3,400,373 - -1.1 3,400,402 + -1.8 3,400,406 + -0.5 3,400,409 - -0.5 3,400,409 - -0.5 3,400,418 + +0.5 3,400,418 + +0.5 3,400,418 + +0.5 3,400,419 + +0.5 3,400,564 - +0.5 3,400,575 - -1.1 3,400,590 - +0.5 3,400,645 + -0.5 3,400,688 + +0.5 3,400,696 - -1.1 3,400,831 - Dsui_3171 0.21 -2.1 3,400,879 - Dsui_3171 0.29 -1.8 3,400,946 - Dsui_3171 0.39 -1.5 3,401,021 + +0.5 3,401,173 - +0.5 3,401,179 - Dsui_3171 0.74 -0.5 3,401,191 + -1.5 3,401,332 + +0.5 3,401,342 + +0.5 3,401,478 + -1.5 3,401,486 - +0.5 3,401,558 - +0.5 3,401,739 - -0.5 3,401,798 + +0.5 3,401,890 - +0.5 3,401,989 + Dsui_3172 0.61 +0.5 3,401,999 + +0.5 3,402,000 + +0.5 3,402,140 - +0.5 3,402,140 - +0.5 3,402,150 - Dsui_3172 0.79 +0.5 3,402,157 + +0.5 3,402,191 + Dsui_3172 0.83 -1.5 3,402,219 - +0.5 3,402,228 - -0.5 3,402,236 + +0.5 3,402,288 + -0.5
Or see this region's nucleotide sequence