Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3135 and Dsui_3136 are separated by 47 nucleotides Dsui_3136 and Dsui_3137 are separated by 89 nucleotides Dsui_3137 and Dsui_3138 are separated by 83 nucleotides
Dsui_3135: Dsui_3135 - HflK protein, at 3,356,912 to 3,358,186
_3135
Dsui_3136: Dsui_3136 - GTP-binding protein HflX, at 3,358,234 to 3,359,421
_3136
Dsui_3137: Dsui_3137 - RNA chaperone Hfq, at 3,359,511 to 3,359,750
_3137
Dsui_3138: Dsui_3138 - ribosome-associated GTPase EngA, at 3,359,834 to 3,361,219
_3138
Position (kb)
3358
3359
3360 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3357.422 kb on - strand, within Dsui_3135 at 3358.204 kb on - strand at 3358.394 kb on + strand, within Dsui_3136 at 3358.501 kb on + strand at 3358.538 kb on - strand, within Dsui_3136 at 3358.592 kb on - strand, within Dsui_3136 at 3358.647 kb on + strand, within Dsui_3136 at 3358.812 kb on - strand, within Dsui_3136 at 3358.883 kb on - strand, within Dsui_3136 at 3358.915 kb on - strand, within Dsui_3136 at 3358.979 kb on + strand, within Dsui_3136 at 3358.990 kb on + strand, within Dsui_3136 at 3359.115 kb on - strand, within Dsui_3136 at 3359.119 kb on - strand, within Dsui_3136 at 3359.125 kb on - strand, within Dsui_3136 at 3359.151 kb on + strand, within Dsui_3136 at 3359.249 kb on - strand, within Dsui_3136 at 3359.280 kb on - strand, within Dsui_3136 at 3359.299 kb on + strand, within Dsui_3136 at 3359.333 kb on + strand at 3359.333 kb on + strand at 3359.367 kb on - strand at 3359.367 kb on - strand at 3359.367 kb on - strand at 3359.532 kb on - strand at 3359.753 kb on - strand at 3359.826 kb on - strand at 3359.901 kb on - strand at 3359.901 kb on - strand at 3359.901 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 3,357,422 - Dsui_3135 0.40 -0.4 3,358,204 - -3.5 3,358,394 + Dsui_3136 0.13 -1.0 3,358,501 + -1.0 3,358,538 - Dsui_3136 0.26 -0.6 3,358,592 - Dsui_3136 0.30 -0.3 3,358,647 + Dsui_3136 0.35 +0.6 3,358,812 - Dsui_3136 0.49 -0.5 3,358,883 - Dsui_3136 0.55 -0.4 3,358,915 - Dsui_3136 0.57 -0.7 3,358,979 + Dsui_3136 0.63 +0.6 3,358,990 + Dsui_3136 0.64 +0.6 3,359,115 - Dsui_3136 0.74 -0.7 3,359,119 - Dsui_3136 0.74 -0.4 3,359,125 - Dsui_3136 0.75 -0.6 3,359,151 + Dsui_3136 0.77 -2.9 3,359,249 - Dsui_3136 0.85 -0.4 3,359,280 - Dsui_3136 0.88 -0.7 3,359,299 + Dsui_3136 0.90 -0.4 3,359,333 + -1.0 3,359,333 + -0.4 3,359,367 - -0.8 3,359,367 - -0.4 3,359,367 - -0.5 3,359,532 - -1.2 3,359,753 - -3.5 3,359,826 - -0.5 3,359,901 - -0.6 3,359,901 - -0.0 3,359,901 - -0.7
Or see this region's nucleotide sequence