Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2772 and Dsui_2773 are separated by 338 nucleotides Dsui_2773 and Dsui_2775 are separated by 951 nucleotides
Dsui_2772: Dsui_2772 - uncharacterized protein, possibly involved in aromatic compounds catabolism, at 2,936,090 to 2,936,551
_2772
Dsui_2773: Dsui_2773 - putative enzyme involved in biosynthesis of extracellular polysaccharides, at 2,936,890 to 2,937,207
_2773
Dsui_2775: Dsui_2775 - hypothetical protein, at 2,938,159 to 2,938,806
_2775
Position (kb)
2936
2937
2938 Strain fitness (log2 ratio)
-2
-1
0
1 at 2936.106 kb on - strand at 2936.230 kb on - strand, within Dsui_2772 at 2936.241 kb on - strand, within Dsui_2772 at 2936.440 kb on - strand, within Dsui_2772 at 2936.501 kb on - strand, within Dsui_2772 at 2936.662 kb on - strand at 2937.104 kb on - strand at 2937.108 kb on + strand, within Dsui_2773 at 2937.120 kb on + strand, within Dsui_2773 at 2937.135 kb on - strand, within Dsui_2773 at 2937.346 kb on + strand at 2937.441 kb on + strand at 2937.468 kb on + strand at 2937.528 kb on - strand at 2937.548 kb on - strand at 2937.619 kb on - strand at 2937.771 kb on + strand at 2937.779 kb on - strand at 2937.794 kb on + strand at 2937.993 kb on + strand at 2938.006 kb on - strand at 2938.008 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,936,106 - +0.8 2,936,230 - Dsui_2772 0.30 -0.8 2,936,241 - Dsui_2772 0.33 -1.2 2,936,440 - Dsui_2772 0.76 +0.8 2,936,501 - Dsui_2772 0.89 -0.2 2,936,662 - +0.8 2,937,104 - +0.8 2,937,108 + Dsui_2773 0.69 -2.0 2,937,120 + Dsui_2773 0.72 -0.1 2,937,135 - Dsui_2773 0.77 -1.5 2,937,346 + -1.9 2,937,441 + -1.1 2,937,468 + -0.4 2,937,528 - -0.8 2,937,548 - +0.8 2,937,619 - -2.2 2,937,771 + -1.0 2,937,779 - -0.2 2,937,794 + +0.1 2,937,993 + +1.0 2,938,006 - +0.8 2,938,008 + -0.5
Or see this region's nucleotide sequence