Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2704 and Dsui_2705 are separated by 106 nucleotides Dsui_2705 and Dsui_2706 are separated by 7 nucleotides Dsui_2706 and Dsui_2707 are separated by 21 nucleotides
Dsui_2704: Dsui_2704 - yecA family protein, at 2,860,914 to 2,861,612
_2704
Dsui_2705: Dsui_2705 - permease, at 2,861,719 to 2,863,008
_2705
Dsui_2706: Dsui_2706 - adenine phosphoribosyltransferase, at 2,863,016 to 2,863,543
_2706
Dsui_2707: Dsui_2707 - putative permease, at 2,863,565 to 2,864,470
_2707
Position (kb)
2861
2862
2863
2864 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2860.899 kb on + strand at 2860.907 kb on - strand at 2860.950 kb on + strand at 2861.079 kb on + strand, within Dsui_2704 at 2861.093 kb on - strand at 2861.404 kb on + strand, within Dsui_2704 at 2861.426 kb on + strand, within Dsui_2704 at 2861.584 kb on + strand at 2861.627 kb on - strand at 2861.627 kb on - strand at 2861.657 kb on + strand at 2861.746 kb on + strand at 2861.751 kb on + strand at 2861.792 kb on - strand at 2862.036 kb on - strand at 2862.329 kb on + strand at 2862.456 kb on - strand at 2862.573 kb on + strand, within Dsui_2705 at 2862.593 kb on + strand, within Dsui_2705 at 2862.736 kb on + strand, within Dsui_2705 at 2862.765 kb on + strand, within Dsui_2705 at 2862.835 kb on - strand at 2862.948 kb on + strand at 2862.978 kb on + strand at 2863.002 kb on + strand at 2863.002 kb on + strand at 2863.002 kb on + strand at 2863.002 kb on + strand at 2863.010 kb on - strand at 2863.010 kb on - strand at 2863.010 kb on - strand at 2863.010 kb on - strand at 2863.010 kb on - strand at 2863.010 kb on - strand at 2863.013 kb on + strand at 2863.015 kb on + strand at 2863.063 kb on + strand at 2863.082 kb on - strand at 2863.097 kb on + strand, within Dsui_2706 at 2863.155 kb on + strand, within Dsui_2706 at 2863.217 kb on + strand, within Dsui_2706 at 2863.225 kb on - strand at 2863.268 kb on + strand, within Dsui_2706 at 2863.294 kb on + strand at 2863.294 kb on + strand, within Dsui_2706 at 2863.341 kb on - strand, within Dsui_2706 at 2863.483 kb on + strand, within Dsui_2706 at 2863.529 kb on - strand at 2863.631 kb on - strand at 2863.740 kb on + strand at 2863.759 kb on + strand, within Dsui_2707 at 2863.772 kb on - strand, within Dsui_2707 at 2863.844 kb on + strand, within Dsui_2707 at 2863.926 kb on + strand, within Dsui_2707 at 2863.934 kb on - strand at 2863.948 kb on + strand at 2863.971 kb on - strand, within Dsui_2707
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,860,899 + -0.5 2,860,907 - +0.8 2,860,950 + -1.0 2,861,079 + Dsui_2704 0.24 -0.2 2,861,093 - -0.2 2,861,404 + Dsui_2704 0.70 +0.3 2,861,426 + Dsui_2704 0.73 -0.8 2,861,584 + -0.3 2,861,627 - -0.2 2,861,627 - +0.8 2,861,657 + -1.7 2,861,746 + -1.8 2,861,751 + +0.8 2,861,792 - +0.8 2,862,036 - +0.8 2,862,329 + -0.8 2,862,456 - +0.8 2,862,573 + Dsui_2705 0.66 -1.3 2,862,593 + Dsui_2705 0.68 -0.8 2,862,736 + Dsui_2705 0.79 -2.1 2,862,765 + Dsui_2705 0.81 +0.8 2,862,835 - -0.2 2,862,948 + +0.8 2,862,978 + -0.8 2,863,002 + +2.4 2,863,002 + -0.2 2,863,002 + -0.2 2,863,002 + -1.5 2,863,010 - +0.8 2,863,010 - +0.8 2,863,010 - +0.8 2,863,010 - +0.8 2,863,010 - -0.2 2,863,010 - -0.2 2,863,013 + -1.0 2,863,015 + -1.0 2,863,063 + -1.5 2,863,082 - -0.2 2,863,097 + Dsui_2706 0.15 +0.2 2,863,155 + Dsui_2706 0.26 -0.8 2,863,217 + Dsui_2706 0.38 -1.5 2,863,225 - -0.8 2,863,268 + Dsui_2706 0.48 -1.5 2,863,294 + +0.8 2,863,294 + Dsui_2706 0.53 +1.4 2,863,341 - Dsui_2706 0.62 -0.8 2,863,483 + Dsui_2706 0.88 +0.8 2,863,529 - -2.0 2,863,631 - -0.2 2,863,740 + +0.8 2,863,759 + Dsui_2707 0.21 -1.2 2,863,772 - Dsui_2707 0.23 -0.2 2,863,844 + Dsui_2707 0.31 -0.2 2,863,926 + Dsui_2707 0.40 -2.2 2,863,934 - +0.8 2,863,948 + +0.8 2,863,971 - Dsui_2707 0.45 +0.8
Or see this region's nucleotide sequence