Strain Fitness in Dechlorosoma suillum PS around Dsui_2703
Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0009 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,856,054 | - | Dsui_2702 | 0.39 | -5.4 | |
2,856,466 | - | Dsui_2702 | 0.67 | -2.8 | |
2,856,754 | - | Dsui_2702 | 0.87 | -5.3 | |
2,856,763 | - | Dsui_2702 | 0.88 | -3.3 | |
2,856,970 | - | -1.9 | |||
2,857,127 | - | -2.5 | |||
2,857,140 | - | -3.1 | |||
2,857,165 | - | -1.2 | |||
2,857,186 | + | +0.8 | |||
2,857,208 | - | -2.4 | |||
2,857,265 | - | -4.3 | |||
2,857,498 | - | Dsui_2703 | 0.15 | -2.4 | |
2,857,614 | - | Dsui_2703 | 0.19 | -1.8 | |
2,857,638 | - | Dsui_2703 | 0.19 | -2.4 | |
2,857,934 | - | Dsui_2703 | 0.28 | -1.4 | |
2,858,164 | - | Dsui_2703 | 0.34 | -3.5 | |
2,858,377 | - | Dsui_2703 | 0.40 | -2.7 | |
2,858,669 | - | Dsui_2703 | 0.49 | -3.5 | |
2,859,854 | - | Dsui_2703 | 0.83 | -4.1 | |
2,860,028 | - | Dsui_2703 | 0.88 | -3.6 | |
2,860,028 | - | Dsui_2703 | 0.88 | -2.9 | |
2,860,484 | - | -1.5 | |||
2,860,598 | - | +0.8 | |||
2,860,648 | + | +0.8 | |||
2,860,899 | + | -0.5 | |||
2,860,907 | - | +0.8 | |||
2,860,950 | + | -1.0 | |||
2,861,079 | + | Dsui_2704 | 0.24 | -0.2 | |
2,861,093 | - | -0.2 | |||
2,861,404 | + | Dsui_2704 | 0.70 | +0.3 | |
2,861,426 | + | Dsui_2704 | 0.73 | -0.8 |
Or see this region's nucleotide sequence