Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2652 and Dsui_2653 are separated by 29 nucleotides Dsui_2653 and Dsui_2654 are separated by 16 nucleotides Dsui_2654 and Dsui_2655 overlap by 4 nucleotides Dsui_2655 and Dsui_2656 are separated by 13 nucleotides
Dsui_2652: Dsui_2652 - hydrolase, TatD family, at 2,808,188 to 2,808,970
_2652
Dsui_2653: Dsui_2653 - Tfp pilus assembly protein PilZ, at 2,809,000 to 2,809,386
_2653
Dsui_2654: Dsui_2654 - DNA polymerase III, delta'' subunit, at 2,809,403 to 2,810,428
_2654
Dsui_2655: Dsui_2655 - thymidylate kinase, at 2,810,425 to 2,811,036
_2655
Dsui_2656: Dsui_2656 - conserved hypothetical protein, YceG family, at 2,811,050 to 2,812,045
_2656
Position (kb)
2809
2810
2811 Strain fitness (log2 ratio)
-2
-1
0
1 at 2808.493 kb on + strand at 2808.513 kb on - strand, within Dsui_2652 at 2808.527 kb on + strand, within Dsui_2652 at 2808.580 kb on + strand at 2808.580 kb on + strand at 2808.617 kb on - strand, within Dsui_2652 at 2808.622 kb on - strand, within Dsui_2652 at 2808.624 kb on + strand, within Dsui_2652 at 2808.765 kb on + strand, within Dsui_2652 at 2808.773 kb on - strand, within Dsui_2652 at 2808.795 kb on - strand, within Dsui_2652 at 2808.815 kb on + strand at 2808.816 kb on + strand at 2808.835 kb on - strand, within Dsui_2652 at 2808.855 kb on - strand, within Dsui_2652 at 2808.941 kb on + strand at 2809.037 kb on - strand at 2809.063 kb on - strand, within Dsui_2653 at 2809.108 kb on + strand, within Dsui_2653 at 2809.123 kb on - strand, within Dsui_2653 at 2809.131 kb on - strand, within Dsui_2653 at 2809.188 kb on + strand at 2809.196 kb on - strand, within Dsui_2653 at 2809.390 kb on - strand at 2809.409 kb on - strand at 2811.094 kb on + strand at 2811.250 kb on + strand at 2811.250 kb on - strand, within Dsui_2656 at 2811.265 kb on + strand, within Dsui_2656 at 2811.273 kb on - strand, within Dsui_2656 at 2811.327 kb on + strand, within Dsui_2656
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,808,493 + +0.7 2,808,513 - Dsui_2652 0.42 -0.1 2,808,527 + Dsui_2652 0.43 -0.9 2,808,580 + -0.3 2,808,580 + -0.3 2,808,617 - Dsui_2652 0.55 -0.6 2,808,622 - Dsui_2652 0.55 -0.4 2,808,624 + Dsui_2652 0.56 +0.7 2,808,765 + Dsui_2652 0.74 +0.7 2,808,773 - Dsui_2652 0.75 -0.7 2,808,795 - Dsui_2652 0.78 -0.8 2,808,815 + -0.9 2,808,816 + +0.7 2,808,835 - Dsui_2652 0.83 -0.1 2,808,855 - Dsui_2652 0.85 +0.0 2,808,941 + +0.7 2,809,037 - -0.4 2,809,063 - Dsui_2653 0.16 -0.3 2,809,108 + Dsui_2653 0.28 +0.7 2,809,123 - Dsui_2653 0.32 +0.7 2,809,131 - Dsui_2653 0.34 -0.4 2,809,188 + +0.7 2,809,196 - Dsui_2653 0.51 -0.4 2,809,390 - -0.3 2,809,409 - -0.6 2,811,094 + +0.7 2,811,250 + -0.3 2,811,250 - Dsui_2656 0.20 -0.2 2,811,265 + Dsui_2656 0.22 -0.9 2,811,273 - Dsui_2656 0.22 -1.8 2,811,327 + Dsui_2656 0.28 -0.9
Or see this region's nucleotide sequence