Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2356 and Dsui_2357 are separated by 76 nucleotides Dsui_2357 and Dsui_2358 are separated by 98 nucleotides Dsui_2358 and Dsui_2359 are separated by 39 nucleotides Dsui_2359 and Dsui_2360 are separated by 2 nucleotides
Dsui_2356: Dsui_2356 - hypothetical protein, at 2,507,546 to 2,508,124
_2356
Dsui_2357: Dsui_2357 - hypothetical protein, at 2,508,201 to 2,508,767
_2357
Dsui_2358: Dsui_2358 - signal transduction histidine kinase, at 2,508,866 to 2,510,302
_2358
Dsui_2359: Dsui_2359 - hypothetical protein, at 2,510,342 to 2,510,794
_2359
Dsui_2360: Dsui_2360 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,510,797 to 2,512,158
_2360
Position (kb)
2508
2509
2510
2511 Strain fitness (log2 ratio)
-2
-1
0
1 at 2507.909 kb on + strand at 2508.118 kb on + strand at 2508.148 kb on + strand at 2508.159 kb on + strand at 2508.169 kb on + strand at 2508.292 kb on + strand at 2508.466 kb on - strand at 2508.595 kb on + strand, within Dsui_2357 at 2508.837 kb on + strand at 2509.014 kb on + strand, within Dsui_2358 at 2509.120 kb on + strand, within Dsui_2358 at 2509.285 kb on - strand at 2509.314 kb on - strand at 2509.753 kb on + strand, within Dsui_2358 at 2509.808 kb on + strand, within Dsui_2358 at 2510.000 kb on + strand, within Dsui_2358 at 2510.012 kb on + strand at 2510.036 kb on + strand, within Dsui_2358 at 2510.127 kb on + strand, within Dsui_2358 at 2510.321 kb on + strand at 2510.466 kb on - strand at 2510.516 kb on + strand, within Dsui_2359 at 2510.599 kb on + strand, within Dsui_2359 at 2510.668 kb on + strand, within Dsui_2359 at 2510.672 kb on - strand at 2510.802 kb on - strand at 2510.975 kb on + strand, within Dsui_2360 at 2511.202 kb on + strand, within Dsui_2360
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,507,909 + +0.9 2,508,118 + -0.7 2,508,148 + +0.9 2,508,159 + +0.9 2,508,169 + -0.1 2,508,292 + +0.9 2,508,466 - -0.7 2,508,595 + Dsui_2357 0.69 +0.9 2,508,837 + +0.9 2,509,014 + Dsui_2358 0.10 +0.9 2,509,120 + Dsui_2358 0.18 -0.7 2,509,285 - +0.9 2,509,314 - -0.1 2,509,753 + Dsui_2358 0.62 -0.7 2,509,808 + Dsui_2358 0.66 -1.5 2,510,000 + Dsui_2358 0.79 +0.9 2,510,012 + +0.9 2,510,036 + Dsui_2358 0.81 -0.3 2,510,127 + Dsui_2358 0.88 +0.7 2,510,321 + +1.0 2,510,466 - -0.1 2,510,516 + Dsui_2359 0.38 -0.7 2,510,599 + Dsui_2359 0.57 -0.6 2,510,668 + Dsui_2359 0.72 +0.3 2,510,672 - -0.7 2,510,802 - -1.1 2,510,975 + Dsui_2360 0.13 -0.6 2,511,202 + Dsui_2360 0.30 -1.8
Or see this region's nucleotide sequence