Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2303 and Dsui_2304 are separated by 29 nucleotides Dsui_2304 and Dsui_2305 overlap by 1 nucleotides Dsui_2305 and Dsui_2306 are separated by 200 nucleotides Dsui_2306 and Dsui_2307 are separated by 31 nucleotides
Dsui_2303: Dsui_2303 - putative membrane protein, at 2,460,365 to 2,461,030
_2303
Dsui_2304: Dsui_2304 - electron transfer flavoprotein, alpha subunit, at 2,461,060 to 2,461,989
_2304
Dsui_2305: Dsui_2305 - electron transfer flavoprotein, beta subunit, at 2,461,989 to 2,462,738
_2305
Dsui_2306: Dsui_2306 - transcriptional regulator, at 2,462,939 to 2,463,523
_2306
Dsui_2307: Dsui_2307 - putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,463,555 to 2,464,214
_2307
Position (kb)
2461
2462
2463 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2460.992 kb on + strand at 2461.000 kb on - strand at 2461.000 kb on - strand at 2461.005 kb on - strand at 2461.057 kb on + strand at 2461.177 kb on - strand, within Dsui_2304 at 2461.384 kb on + strand, within Dsui_2304 at 2461.454 kb on - strand, within Dsui_2304 at 2461.503 kb on - strand, within Dsui_2304 at 2461.561 kb on - strand, within Dsui_2304 at 2461.588 kb on + strand at 2462.045 kb on + strand at 2462.061 kb on - strand at 2462.089 kb on - strand, within Dsui_2305 at 2462.210 kb on - strand, within Dsui_2305 at 2462.272 kb on - strand, within Dsui_2305 at 2462.311 kb on - strand, within Dsui_2305 at 2462.439 kb on - strand, within Dsui_2305 at 2462.458 kb on - strand, within Dsui_2305 at 2462.690 kb on + strand at 2462.747 kb on + strand at 2462.747 kb on + strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.755 kb on - strand at 2462.788 kb on + strand at 2462.796 kb on - strand at 2462.806 kb on + strand at 2462.814 kb on - strand at 2462.814 kb on - strand at 2462.820 kb on + strand at 2462.828 kb on - strand at 2462.830 kb on + strand at 2462.838 kb on - strand at 2462.870 kb on - strand at 2463.108 kb on + strand, within Dsui_2306 at 2463.116 kb on - strand at 2463.126 kb on - strand at 2463.126 kb on - strand, within Dsui_2306 at 2463.138 kb on + strand, within Dsui_2306 at 2463.227 kb on + strand, within Dsui_2306 at 2463.340 kb on + strand, within Dsui_2306 at 2463.405 kb on + strand, within Dsui_2306 at 2463.413 kb on - strand at 2463.628 kb on - strand, within Dsui_2307 at 2463.635 kb on + strand, within Dsui_2307 at 2463.635 kb on + strand, within Dsui_2307 at 2463.738 kb on - strand, within Dsui_2307
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,460,992 + -1.1 2,461,000 - +0.0 2,461,000 - -0.1 2,461,005 - -0.1 2,461,057 + +0.9 2,461,177 - Dsui_2304 0.13 -1.9 2,461,384 + Dsui_2304 0.35 -0.1 2,461,454 - Dsui_2304 0.42 -1.4 2,461,503 - Dsui_2304 0.48 -0.7 2,461,561 - Dsui_2304 0.54 -1.3 2,461,588 + +0.9 2,462,045 + +0.9 2,462,061 - -0.6 2,462,089 - Dsui_2305 0.13 -2.5 2,462,210 - Dsui_2305 0.29 -2.6 2,462,272 - Dsui_2305 0.38 -2.6 2,462,311 - Dsui_2305 0.43 -0.9 2,462,439 - Dsui_2305 0.60 -2.9 2,462,458 - Dsui_2305 0.63 -2.4 2,462,690 + +0.9 2,462,747 + -0.1 2,462,747 + -0.1 2,462,755 - +0.2 2,462,755 - -0.7 2,462,755 - -2.1 2,462,755 - -0.1 2,462,755 - -1.0 2,462,788 + -0.7 2,462,796 - +0.0 2,462,806 + +0.9 2,462,814 - +0.4 2,462,814 - +0.6 2,462,820 + -0.1 2,462,828 - -0.3 2,462,830 + +2.7 2,462,838 - -1.6 2,462,870 - -0.2 2,463,108 + Dsui_2306 0.29 -0.8 2,463,116 - +0.9 2,463,126 - +0.9 2,463,126 - Dsui_2306 0.32 -1.1 2,463,138 + Dsui_2306 0.34 -0.4 2,463,227 + Dsui_2306 0.49 +0.1 2,463,340 + Dsui_2306 0.69 -1.0 2,463,405 + Dsui_2306 0.80 -1.3 2,463,413 - +0.9 2,463,628 - Dsui_2307 0.11 +0.1 2,463,635 + Dsui_2307 0.12 -0.1 2,463,635 + Dsui_2307 0.12 -0.7 2,463,738 - Dsui_2307 0.28 +0.3
Or see this region's nucleotide sequence