Experiment: ALP with Cisplatin 0.0009 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2285 and Dsui_2286 are separated by 26 nucleotides Dsui_2286 and Dsui_2287 are separated by 157 nucleotides Dsui_2287 and Dsui_2288 are separated by 112 nucleotides Dsui_2288 and Dsui_2289 are separated by 14 nucleotides
Dsui_2285: Dsui_2285 - hypothetical protein, at 2,438,199 to 2,439,014
_2285
Dsui_2286: Dsui_2286 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,439,041 to 2,439,835
_2286
Dsui_2287: Dsui_2287 - aminopeptidase N, at 2,439,993 to 2,442,602
_2287
Dsui_2288: Dsui_2288 - hypothetical protein, at 2,442,715 to 2,443,389
_2288
Dsui_2289: Dsui_2289 - qaraquat-inducible protein B, at 2,443,404 to 2,444,975
_2289
Position (kb)
2439
2440
2441
2442
2443 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2439.087 kb on - strand at 2439.181 kb on - strand, within Dsui_2286 at 2439.197 kb on - strand, within Dsui_2286 at 2439.212 kb on - strand, within Dsui_2286 at 2439.388 kb on + strand at 2439.483 kb on - strand at 2439.542 kb on + strand at 2439.595 kb on + strand, within Dsui_2286 at 2439.837 kb on - strand at 2439.924 kb on + strand at 2439.924 kb on + strand at 2440.015 kb on + strand at 2440.028 kb on + strand at 2440.037 kb on - strand at 2440.068 kb on - strand at 2440.110 kb on + strand at 2440.233 kb on + strand at 2440.255 kb on + strand, within Dsui_2287 at 2440.255 kb on + strand, within Dsui_2287 at 2440.263 kb on - strand, within Dsui_2287 at 2440.354 kb on + strand, within Dsui_2287 at 2440.432 kb on + strand, within Dsui_2287 at 2440.481 kb on + strand, within Dsui_2287 at 2440.515 kb on - strand, within Dsui_2287 at 2440.534 kb on + strand, within Dsui_2287 at 2440.614 kb on - strand, within Dsui_2287 at 2440.838 kb on + strand, within Dsui_2287 at 2440.843 kb on + strand, within Dsui_2287 at 2440.851 kb on - strand at 2440.945 kb on + strand, within Dsui_2287 at 2440.977 kb on - strand, within Dsui_2287 at 2441.004 kb on + strand, within Dsui_2287 at 2441.056 kb on - strand, within Dsui_2287 at 2441.129 kb on + strand at 2441.137 kb on + strand, within Dsui_2287 at 2441.137 kb on - strand at 2441.169 kb on - strand, within Dsui_2287 at 2441.245 kb on + strand, within Dsui_2287 at 2441.250 kb on + strand, within Dsui_2287 at 2441.351 kb on - strand, within Dsui_2287 at 2441.356 kb on - strand, within Dsui_2287 at 2441.392 kb on - strand, within Dsui_2287 at 2441.406 kb on - strand, within Dsui_2287 at 2441.414 kb on + strand, within Dsui_2287 at 2441.421 kb on + strand at 2441.830 kb on + strand, within Dsui_2287 at 2441.830 kb on + strand, within Dsui_2287 at 2441.883 kb on - strand at 2441.927 kb on + strand at 2441.930 kb on - strand at 2442.001 kb on - strand at 2442.087 kb on - strand at 2442.141 kb on + strand, within Dsui_2287 at 2442.191 kb on - strand at 2442.201 kb on - strand at 2442.274 kb on - strand at 2442.422 kb on + strand at 2442.422 kb on + strand at 2442.422 kb on + strand at 2442.453 kb on - strand at 2442.468 kb on + strand at 2442.513 kb on + strand at 2442.521 kb on - strand at 2442.528 kb on + strand at 2442.558 kb on - strand at 2442.911 kb on + strand at 2442.978 kb on + strand, within Dsui_2288 at 2443.131 kb on + strand at 2443.179 kb on + strand, within Dsui_2288 at 2443.408 kb on - strand at 2443.568 kb on - strand, within Dsui_2289 at 2443.596 kb on - strand, within Dsui_2289
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0009 mg/ml remove 2,439,087 - +0.9 2,439,181 - Dsui_2286 0.18 -0.1 2,439,197 - Dsui_2286 0.20 +0.9 2,439,212 - Dsui_2286 0.22 -0.1 2,439,388 + +0.9 2,439,483 - +0.9 2,439,542 + +0.9 2,439,595 + Dsui_2286 0.70 -0.7 2,439,837 - +0.9 2,439,924 + -1.4 2,439,924 + -0.7 2,440,015 + +0.9 2,440,028 + -2.4 2,440,037 - +0.9 2,440,068 - +0.9 2,440,110 + -1.1 2,440,233 + -1.4 2,440,255 + Dsui_2287 0.10 -0.7 2,440,255 + Dsui_2287 0.10 -0.7 2,440,263 - Dsui_2287 0.10 -0.1 2,440,354 + Dsui_2287 0.14 +0.1 2,440,432 + Dsui_2287 0.17 -0.1 2,440,481 + Dsui_2287 0.19 +0.9 2,440,515 - Dsui_2287 0.20 +0.9 2,440,534 + Dsui_2287 0.21 +1.5 2,440,614 - Dsui_2287 0.24 -0.1 2,440,838 + Dsui_2287 0.32 -0.7 2,440,843 + Dsui_2287 0.33 -0.7 2,440,851 - +0.9 2,440,945 + Dsui_2287 0.36 +0.9 2,440,977 - Dsui_2287 0.38 -0.1 2,441,004 + Dsui_2287 0.39 -1.7 2,441,056 - Dsui_2287 0.41 -0.4 2,441,129 + +0.9 2,441,137 + Dsui_2287 0.44 +0.9 2,441,137 - +0.9 2,441,169 - Dsui_2287 0.45 +0.9 2,441,245 + Dsui_2287 0.48 -0.7 2,441,250 + Dsui_2287 0.48 -2.3 2,441,351 - Dsui_2287 0.52 -0.1 2,441,356 - Dsui_2287 0.52 -1.1 2,441,392 - Dsui_2287 0.54 +0.9 2,441,406 - Dsui_2287 0.54 -0.7 2,441,414 + Dsui_2287 0.54 +0.3 2,441,421 + +0.9 2,441,830 + Dsui_2287 0.70 +0.7 2,441,830 + Dsui_2287 0.70 +0.2 2,441,883 - -0.1 2,441,927 + +0.9 2,441,930 - +0.9 2,442,001 - -0.1 2,442,087 - +0.9 2,442,141 + Dsui_2287 0.82 +0.9 2,442,191 - +0.9 2,442,201 - -0.1 2,442,274 - +0.9 2,442,422 + -0.1 2,442,422 + +0.9 2,442,422 + -2.1 2,442,453 - -0.1 2,442,468 + +2.9 2,442,513 + -0.4 2,442,521 - +0.9 2,442,528 + -2.6 2,442,558 - -0.7 2,442,911 + -0.1 2,442,978 + Dsui_2288 0.39 -0.1 2,443,131 + +0.9 2,443,179 + Dsui_2288 0.69 -0.7 2,443,408 - +0.9 2,443,568 - Dsui_2289 0.10 -1.7 2,443,596 - Dsui_2289 0.12 +0.9
Or see this region's nucleotide sequence